RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 IGHV3OR16-13A0A075B7E8 117 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 IGHV3-74A0A0B4J1X5 117 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 C19orf71A6NCJ1 209 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 FAM181BA6NEQ2 426 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 BUB3O43684 328 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 IGLV1-40P01703 118 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 PF4V1P10720 104 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 HLA-DMBP28068 263 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 PDZD11Q5EBL8 140 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 IGFL4Q6B9Z1 124 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 TMEM183AQ8IXX5 376 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 TMEM75Q8N9X5 138 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 GPR61Q9BZJ8 451 aa16.1■□□□□ 0.17
YBX3-202ENST00000279550 IGHV3-49A0A0A0MS15 119 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 IGHV3-11P01762 117 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 ARL3P36405 182 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 HILS1P60008 231 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 PSG9Q00887 426 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 RELQ04864 619 aaPredicted RBP16.09■□□□□ 0.17
YBX3-202ENST00000279550 Q8N2B8 174 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 AAMDCQ9H7C9 122 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 PSG8Q9UQ74 426 aa16.09■□□□□ 0.17
YBX3-202ENST00000279550 XKRY2A2RUG3 117 aa16.08■□□□□ 0.17
YBX3-202ENST00000279550 IGHG4P01861 327 aa16.08■□□□□ 0.17
YBX3-202ENST00000279550 PSG3Q16557 428 aa16.08■□□□□ 0.17
YBX3-202ENST00000279550 U3KQE9 123 aa16.08■□□□□ 0.17
YBX3-202ENST00000279550 MTORP42345 2549 aa16.08■□□□□ 0.17
YBX3-202ENST00000279550 IZUMO1RA6ND01 250 aa16.08■□□□□ 0.16
YBX3-202ENST00000279550 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.07■□□□□ 0.16
YBX3-202ENST00000279550 S100A8P05109 93 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 RNASE1P07998 156 aaKnown RBP16.07■□□□□ 0.16
YBX3-202ENST00000279550 S100A7P31151 101 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 MEOX2P50222 304 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 MRPL54Q6P161 138 aaKnown RBP16.07■□□□□ 0.16
YBX3-202ENST00000279550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 ZC2HC1AQ96GY0 325 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 USMG5Q96IX5 58 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 C12orf57Q99622 126 aa16.07■□□□□ 0.16
YBX3-202ENST00000279550 MRPL18Q9H0U6 180 aaKnown RBP16.07■□□□□ 0.16
YBX3-202ENST00000279550 RPP21Q9H633 154 aaKnown RBP16.07■□□□□ 0.16
YBX3-202ENST00000279550 IGKV2-40A0A087WW87 121 aaPredicted RBP16.06■□□□□ 0.16
YBX3-202ENST00000279550 A0A087X0K7 114 aa16.06■□□□□ 0.16
YBX3-202ENST00000279550 ZNF253O75346 499 aa16.06■□□□□ 0.16
YBX3-202ENST00000279550 IGKV2D-40P01614 121 aaPredicted RBP16.06■□□□□ 0.16
YBX3-202ENST00000279550 COA6Q5JTJ3 125 aaKnown RBP16.06■□□□□ 0.16
YBX3-202ENST00000279550 TSKUQ8WUA8 353 aa16.06■□□□□ 0.16
YBX3-202ENST00000279550 METTL26Q96S19 204 aa16.06■□□□□ 0.16
YBX3-202ENST00000279550 ZNF331Q9NQX6 463 aaPredicted RBP16.06■□□□□ 0.16
YBX3-202ENST00000279550 TMEM136Q6ZRR5 245 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 SNURFLB1AK76 121 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 K7EQM0 130 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 RAB9AP51151 201 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 UNQ9165/PRO28630Q6UXU0 137 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 NUP35Q8NFH5 326 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 NEU1Q99519 415 aa16.05■□□□□ 0.16
YBX3-202ENST00000279550 A0A1B0GUS0 222 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 ZNF705FA8MVS1 300 aaPredicted RBP16.04■□□□□ 0.16
YBX3-202ENST00000279550 CHEK1O14757 476 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 CRLF1O75462 422 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 P01737 135 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 CSN1S1P47710 185 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 C1orf194Q5T5A4 169 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 C10orf99Q6UWK7 81 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 TCF24Q7RTU0 167 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 GBGT1Q8N5D6 347 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 OR4X2Q8NGF9 303 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 C8orf49Q96NF6 230 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 JMJD8Q96S16 334 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 GNB1LQ9BYB4 327 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 ZFP30Q9Y2G7 519 aa16.04■□□□□ 0.16
YBX3-202ENST00000279550 C16orf54Q6UWD8 224 aa16.03■□□□□ 0.16
YBX3-202ENST00000279550 Q6ZSV7 163 aa16.03■□□□□ 0.16
YBX3-202ENST00000279550 NPIPB6E9PJ23 425 aa16.02■□□□□ 0.16
YBX3-202ENST00000279550 CRIP1P50238 77 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 GDF5OSQ5U4N7 250 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 RNF182Q8N6D2 247 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 ARL6IP6Q8N6S5 226 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 GTSF1Q8WW33 167 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 DAZAP1Q96EP5 407 aaKnown RBP16.02■□□□□ 0.15
YBX3-202ENST00000279550 VGLL1Q99990 258 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 NAT8BQ9UHF3 227 aa16.02■□□□□ 0.15
YBX3-202ENST00000279550 NSD1Q96L73 2696 aaPredicted RBP16.01■□□□□ 0.15
YBX3-202ENST00000279550 F8P00451 2351 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 HIGD1CA8MV81 97 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 PRAC2D3DTV9 90 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 NDUFA4O00483 81 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 SMIM6P0DI80 62 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 PSMB8P28062 276 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 CT83Q5H943 113 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 HIST1H2BLQ99880 126 aa16.01■□□□□ 0.15
YBX3-202ENST00000279550 FN1P02751 2386 aaKnown RBP16■□□□□ 0.15
YBX3-202ENST00000279550 TRAV8-2A0A0B4J237 113 aa16■□□□□ 0.15
YBX3-202ENST00000279550 SERTM2A0A1B0GWG4 89 aa16■□□□□ 0.15
YBX3-202ENST00000279550 GRIFINA4D1Z8 144 aa16■□□□□ 0.15
YBX3-202ENST00000279550 FABP4P15090 132 aa16■□□□□ 0.15
YBX3-202ENST00000279550 LCN12Q6JVE5 192 aa16■□□□□ 0.15
YBX3-202ENST00000279550 WDR73Q6P4I2 378 aa16■□□□□ 0.15
YBX3-202ENST00000279550 OR10D4PQ8NGN7 298 aa16■□□□□ 0.15
YBX3-202ENST00000279550 GLMPQ8WWB7 406 aa16■□□□□ 0.15
YBX3-202ENST00000279550 A8MWL6 223 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms