RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 NKX6-2Q9C056 277 aaPredicted RBP12.77□□□□□ -0.37
SKP2-201ENST00000274254 WFDC10AQ9H1F0 79 aa12.77□□□□□ -0.37
SKP2-201ENST00000274254 ZNF705FA8MVS1 300 aaPredicted RBP12.76□□□□□ -0.37
SKP2-201ENST00000274254 RAB14P61106 215 aa12.76□□□□□ -0.37
SKP2-201ENST00000274254 SUMO1P63165 101 aaKnown RBP12.76□□□□□ -0.37
SKP2-201ENST00000274254 CLLU1Q5K131 121 aa12.76□□□□□ -0.37
SKP2-201ENST00000274254 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
SKP2-201ENST00000274254 RPUSD4Q96CM3 377 aaKnown RBP12.76□□□□□ -0.37
SKP2-201ENST00000274254 AGRNO00468 2067 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 DEFB1P60022 68 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 ZNF124Q15973 351 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 CCDC28AQ8IWP9 274 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 ARL6IP6Q8N6S5 226 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 C5orf17Q8NAS9 161 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 DNAH3Q8TD57 4116 aa12.75□□□□□ -0.37
SKP2-201ENST00000274254 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 ATP5G3P48201 142 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 CST9LP1Q5W188 147 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 FOXI2Q6ZQN5 318 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 CITED4Q96RK1 184 aa12.74□□□□□ -0.37
SKP2-201ENST00000274254 SAV1Q9H4B6 383 aaPredicted RBP12.74□□□□□ -0.37
SKP2-201ENST00000274254 F6UB75 175 aa12.73□□□□□ -0.37
SKP2-201ENST00000274254 IFNA1P01562 189 aa12.73□□□□□ -0.37
SKP2-201ENST00000274254 SLC25A5P05141 298 aaKnown RBP12.73□□□□□ -0.37
SKP2-201ENST00000274254 BCL2P10415 239 aa12.73□□□□□ -0.37
SKP2-201ENST00000274254 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
SKP2-201ENST00000274254 CMTM2Q8TAZ6 248 aa12.73□□□□□ -0.37
SKP2-201ENST00000274254 AURKAIP1Q9NWT8 199 aaPredicted RBP12.73□□□□□ -0.37
SKP2-201ENST00000274254 A0A0J9YX75 114 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 KNCNA6PVL3 124 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 DIRC3C9JPN6 131 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 PRB4P10163 310 aaPredicted RBP12.72□□□□□ -0.37
SKP2-201ENST00000274254 TAGLN2P37802 199 aaKnown RBP12.72□□□□□ -0.37
SKP2-201ENST00000274254 CSN1S1P47710 185 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 HAGHQ16775 308 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 OR8A1Q8NGG7 326 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 TCEAL7Q9BRU2 100 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 EPDR1Q9UM22 224 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 LOC102723971A0A1B0GUV8 181 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 C11orf94C9JXX5 98 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 GNG5P63218 68 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 ACTL10Q5JWF8 245 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 EBLN2Q6P2I7 272 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 FAM210AQ96ND0 272 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 VAX2Q9UIW0 290 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
SKP2-201ENST00000274254 RBFOX3A6NFN3 312 aa12.71□□□□□ -0.38
SKP2-201ENST00000274254 H3BMM0 161 aa12.71□□□□□ -0.38
SKP2-201ENST00000274254 PRB2P02812 416 aaPredicted RBP12.71□□□□□ -0.38
SKP2-201ENST00000274254 TCRAP04437 139 aa12.71□□□□□ -0.38
SKP2-201ENST00000274254 ZNF705DP0CH99 300 aaPredicted RBP12.71□□□□□ -0.38
SKP2-201ENST00000274254 ZNF705BP0CI00 300 aaPredicted RBP12.71□□□□□ -0.38
SKP2-201ENST00000274254 MEF2BQ02080 365 aaPredicted RBP12.71□□□□□ -0.38
SKP2-201ENST00000274254 RARRES2Q99969 163 aa12.71□□□□□ -0.38
SKP2-201ENST00000274254 IGKV2-40A0A087WW87 121 aaPredicted RBP12.7□□□□□ -0.38
SKP2-201ENST00000274254 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 A8MTW9 85 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 IGKV2D-40P01614 121 aaPredicted RBP12.7□□□□□ -0.38
SKP2-201ENST00000274254 ZNF506Q5JVG8 444 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 ATG101Q9BSB4 218 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
SKP2-201ENST00000274254 SERTM2A0A1B0GWG4 89 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 A8MZ25 164 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 IGHV4-30-4P0DP06 118 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 CNN1P51911 297 aaKnown RBP12.69□□□□□ -0.38
SKP2-201ENST00000274254 HIST1H1AQ02539 215 aaPredicted RBP12.69□□□□□ -0.38
SKP2-201ENST00000274254 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 GOLT1AQ6ZVE7 132 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 TRPT1Q86TN4 253 aaKnown RBP12.69□□□□□ -0.38
SKP2-201ENST00000274254 OR10J6PQ8NGY7 276 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 CLUHP3Q96NS8 147 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 RPH3ALQ9UNE2 315 aa12.69□□□□□ -0.38
SKP2-201ENST00000274254 NPIPB6E9PJ23 425 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 K7EIL1 84 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 PEX7O00628 323 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
SKP2-201ENST00000274254 TOR2AQ5JU69 321 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 STHQ8IWL8 128 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 CYB561D1Q8N8Q1 229 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 VGLL1Q99990 258 aa12.68□□□□□ -0.38
SKP2-201ENST00000274254 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 C11orf52Q96A22 123 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 AGPAT4-IT1Q9H0P7 198 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 RBMY1BA6NDE4 496 aaKnown RBP12.67□□□□□ -0.38
SKP2-201ENST00000274254 RBMY1EA6NEQ0 496 aaKnown RBP12.67□□□□□ -0.38
SKP2-201ENST00000274254 F6UZH7 168 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 PDE6DO43924 150 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 NDUFS6O75380 124 aaKnown RBP12.67□□□□□ -0.38
SKP2-201ENST00000274254 RBMY1DP0C7P1 496 aaKnown RBP12.67□□□□□ -0.38
SKP2-201ENST00000274254 ERCC8Q13216 396 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 AMTNQ6UX39 209 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 OR4B1Q8NGF8 309 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 EIF5A2Q9GZV4 153 aaKnown RBP12.67□□□□□ -0.38
SKP2-201ENST00000274254 TUBA4BQ9H853 241 aa12.67□□□□□ -0.38
SKP2-201ENST00000274254 K7EQM0 130 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms