RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 KIR2DL4Q99706 377 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 CLEC19AQ6UXS0 136 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 DDB2Q92466 427 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 TRAV2A0A0B4J234 112 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 VDAC2P45880 294 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-201ENST00000269571 ZNF56Q15929 161 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 SSC4DQ8WTU2 575 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 EEF1AKMT3Q96AZ1 226 aa9.79□□□□□ -0.84
ERBB2-201ENST00000269571 SLC25A39Q9BZJ4 359 aaPredicted RBP9.79□□□□□ -0.84
ERBB2-201ENST00000269571 IGF2RP11717 2491 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 TMEM213A2RRL7 107 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 ZNF815PA8K554 130 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 RNF183Q96D59 192 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 TMEM133Q9H2Q1 129 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 SMPXQ9UHP9 88 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 HAX1O00165 279 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 PAX1P15863 534 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 KIAA1671Q9BY89 1806 aa9.78□□□□□ -0.84
ERBB2-201ENST00000269571 FGF23Q9GZV9 251 aaPredicted RBP9.78□□□□□ -0.84
ERBB2-201ENST00000269571 IGHV3-64A0A075B6Q5 118 aa9.77□□□□□ -0.84
ERBB2-201ENST00000269571 FAM159AQ6UWV7 190 aa9.77□□□□□ -0.84
ERBB2-201ENST00000269571 LINC00173Q6ZV60 143 aa9.77□□□□□ -0.84
ERBB2-201ENST00000269571 RNASE6Q93091 150 aaKnown RBP9.77□□□□□ -0.84
ERBB2-201ENST00000269571 FCN3O75636 299 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 LINC00527Q9UJ94 153 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 PRSS29PA6NIE9 313 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 TIMM23O14925 209 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 DUX4L9Q6RFH8 374 aaPredicted RBP9.77□□□□□ -0.85
ERBB2-201ENST00000269571 DSCAML1Q8TD84 2053 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 TRBV7-9A0A0J9YWB2 115 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 C9JAW5 83 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 CTRLP40313 264 aa9.77□□□□□ -0.85
ERBB2-201ENST00000269571 NXT2Q9NPJ8 142 aaKnown RBP9.77□□□□□ -0.85
ERBB2-201ENST00000269571 PIMREGQ9BSJ6 248 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 EDA2RQ9HAV5 297 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 IGKV3OR2-268A0A0C4DH90 116 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 ZNF134P52741 427 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 SIVA1O15304 175 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 NBR2O15453 112 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 TNFRSF6BO95407 300 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 WNT2P09544 360 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
ERBB2-201ENST00000269571 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 TMEM158Q8WZ71 300 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 KIF26AQ9ULI4 1882 aaPredicted RBP9.75□□□□□ -0.85
ERBB2-201ENST00000269571 NPIPB6E9PJ23 425 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 SMIM27A0A1W2PRY6 76 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 TMEM200BQ69YZ2 307 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 C2orf16Q68DN1 1984 aa9.75□□□□□ -0.85
ERBB2-201ENST00000269571 SPAG8Q99932 426 aaPredicted RBP9.74□□□□□ -0.85
ERBB2-201ENST00000269571 CENPVQ7Z7K6 275 aaPredicted RBP9.74□□□□□ -0.85
ERBB2-201ENST00000269571 ERG28Q9UKR5 140 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 SH2D1AO60880 128 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 COX6B1P14854 86 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 LY6DQ14210 128 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 Q86TA4 180 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 TRAV12-3A0A0B4J271 114 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 TRAV40A0A0B4J280 105 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 A0A0U1RRA0 63 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 LY6HO94772 140 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 LGALS9BQ3B8N2 356 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 LGALS9CQ6DKI2 356 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 Q6ZR03 302 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 TMEM167AQ8TBQ9 72 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 TMEM101Q96IK0 257 aa9.74□□□□□ -0.85
ERBB2-201ENST00000269571 IGKV3D-20A0A0C4DH25 116 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 A0A1W2PPI3 338 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 ASIPP42127 132 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 SRSF1Q07955 248 aaKnown RBP eCLIP9.73□□□□□ -0.85
ERBB2-201ENST00000269571 C11orf52Q96A22 123 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 C7orf69Q9H7B7 122 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 TMEM14BQ9NUH8 114 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 LINC01549A6NIU2 74 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 CEACAM4O75871 244 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 RNASE4P34096 147 aaKnown RBP9.73□□□□□ -0.85
ERBB2-201ENST00000269571 FOXI2Q6ZQN5 318 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 SPATA12Q7Z6I5 190 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 SLC25A15Q9Y619 301 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 MYO9AB2RTY4 2548 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 CCDC168Q8NDH2 2452 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
ERBB2-201ENST00000269571 KLRD1Q13241 179 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 MDS2Q8NDY4 140 aa9.73□□□□□ -0.85
ERBB2-201ENST00000269571 PCP2Q8IVA1 136 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 TP73-AS1Q9UF72 201 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 SNRPD3P62318 126 aaKnown RBP9.72□□□□□ -0.85
ERBB2-201ENST00000269571 KLF5Q13887 457 aaPredicted RBP9.72□□□□□ -0.85
ERBB2-201ENST00000269571 C19orf54Q5BKX5 351 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 PVRIGQ6DKI7 326 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 CEND1Q8N111 149 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 EML6Q6ZMW3 1958 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 C2orf82Q6UX34 121 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 NEU4Q8WWR8 484 aaPredicted RBP9.72□□□□□ -0.85
ERBB2-201ENST00000269571 TRGV9Q99603 122 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 CCL19Q99731 98 aa9.72□□□□□ -0.85
ERBB2-201ENST00000269571 SRRM4A7MD48 611 aaKnown RBP9.71□□□□□ -0.85
ERBB2-201ENST00000269571 RRN3P1Q2M238 152 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms