RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 LGALS9BQ3B8N2 356 aa13.03□□□□□ -0.32
GPC1-201ENST00000264039 LGALS9CQ6DKI2 356 aa13.03□□□□□ -0.32
GPC1-201ENST00000264039 ZNF48Q96MX3 618 aaPredicted RBP13.03□□□□□ -0.32
GPC1-201ENST00000264039 MGPP08493 103 aa13.02□□□□□ -0.32
GPC1-201ENST00000264039 EIF4EBP1Q13541 118 aaPredicted RBP13.02□□□□□ -0.32
GPC1-201ENST00000264039 C17orf58Q2M2W7 97 aa13.02□□□□□ -0.32
GPC1-201ENST00000264039 REV3LO60673 3130 aa13.02□□□□□ -0.32
GPC1-201ENST00000264039 SPG11Q96JI7 2443 aa13.02□□□□□ -0.32
GPC1-201ENST00000264039 TRBV20-1A0A075B6N2 111 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 RNFT1Q5M7Z0 435 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 NGBQ9NPG2 151 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 MSRB1Q9NZV6 116 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 IGKV2D-26A0A0A0MRZ7 120 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 FNDC10F2Z333 226 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 HAX1O00165 279 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 UFSP1Q6NVU6 142 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 C8orf46Q8TAG6 207 aa13.02□□□□□ -0.33
GPC1-201ENST00000264039 MRPL35Q9NZE8 188 aaKnown RBP13.01□□□□□ -0.33
GPC1-201ENST00000264039 F8W1H4 67 aa13.01□□□□□ -0.33
GPC1-201ENST00000264039 NEGR1Q7Z3B1 354 aa13.01□□□□□ -0.33
GPC1-201ENST00000264039 FAM104BQ5XKR9 115 aa13.01□□□□□ -0.33
GPC1-201ENST00000264039 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.01□□□□□ -0.33
GPC1-201ENST00000264039 NDUFA4L2Q9NRX3 87 aa13□□□□□ -0.33
GPC1-201ENST00000264039 RAXQ9Y2V3 346 aa13□□□□□ -0.33
GPC1-201ENST00000264039 LINC01549A6NIU2 74 aa13□□□□□ -0.33
GPC1-201ENST00000264039 IGLL5B9A064 214 aa13□□□□□ -0.33
GPC1-201ENST00000264039 ATP5IP56385 69 aaPredicted RBP13□□□□□ -0.33
GPC1-201ENST00000264039 C12orf74Q32Q52 190 aa13□□□□□ -0.33
GPC1-201ENST00000264039 CNTFRP26992 372 aa13□□□□□ -0.33
GPC1-201ENST00000264039 SH2D1AO60880 128 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 EFNA4P52798 201 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 IGHV1-18A0A0C4DH31 117 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 COL6A3P12111 3177 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 SORL1Q92673 2214 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 TRAV26-2A0A0B4J265 109 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 CEND1Q8N111 149 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 GFRA4Q9GZZ7 299 aa12.99□□□□□ -0.33
GPC1-201ENST00000264039 SNCGO76070 127 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 LY6G6EA0A0G2JKS1 128 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 PRR33A8MZF0 331 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 F5H697 171 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 M0R381 172 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 CT83Q5H943 113 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 ONECUT1Q9UBC0 465 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 U3KQA8 63 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 ZNF815PA8K554 130 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 VSTM5A8MXK1 200 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 DDB2Q92466 427 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 ZNF492Q9P255 531 aa12.98□□□□□ -0.33
GPC1-201ENST00000264039 TMEM238LA0A1B0GVL6 79 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 A6NJY4 79 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 C3orf56Q8N813 242 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 SPRY2O43597 315 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 ZFAND6Q6FIF0 208 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 RNF183Q96D59 192 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 SCGB3A1Q96QR1 104 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 SS18L1O75177 396 aaPredicted RBP12.97□□□□□ -0.33
GPC1-201ENST00000264039 MT-ATP8P03928 68 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 DPF1Q92782 380 aa12.97□□□□□ -0.33
GPC1-201ENST00000264039 PRSS29PA6NIE9 313 aa12.96□□□□□ -0.33
GPC1-201ENST00000264039 IGFBPL1Q8WX77 278 aa12.96□□□□□ -0.33
GPC1-201ENST00000264039 PRSS2P07478 247 aa12.96□□□□□ -0.33
GPC1-201ENST00000264039 FGF6P10767 208 aa12.96□□□□□ -0.33
GPC1-201ENST00000264039 Q6AWC8 147 aa12.96□□□□□ -0.33
GPC1-201ENST00000264039 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.33
GPC1-201ENST00000264039 ARHGAP32A7KAX9 2087 aa12.96□□□□□ -0.34
GPC1-201ENST00000264039 SMIM20Q8N5G0 67 aa12.96□□□□□ -0.34
GPC1-201ENST00000264039 RAX2Q96IS3 184 aa12.96□□□□□ -0.34
GPC1-201ENST00000264039 TNFRSF6BO95407 300 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 RNF125Q96EQ8 232 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 BDP1A6H8Y1 2624 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 ATP5LO75964 103 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 APOBEC3AP31941 199 aaPredicted RBP12.95□□□□□ -0.34
GPC1-201ENST00000264039 TMEM170BQ5T4T1 132 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 LYRM7Q5U5X0 104 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 PMS2CLQ68D20 193 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 DLX4Q92988 240 aaPredicted RBP12.95□□□□□ -0.34
GPC1-201ENST00000264039 EXPH5Q8NEV8 1989 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 A0A1B0GW15 77 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 WISP2O76076 250 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 HLA-DRB4P13762 266 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 GAGE2BQ13066 116 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 GAGE2EQ4V326 116 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 C8orf86Q6ZUL3 223 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 RITA1Q96K30 269 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 GAGE2DQ9UEU5 116 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 HLA-DRB4X5D2U9 266 aa12.95□□□□□ -0.34
GPC1-201ENST00000264039 C19orf71A6NCJ1 209 aa12.94□□□□□ -0.34
GPC1-201ENST00000264039 ARRDC1-AS1Q9H2J1 176 aa12.94□□□□□ -0.34
GPC1-201ENST00000264039 PRSS22Q9GZN4 317 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 A8MWV9 139 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 IGHV4-39P01824 125 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 FAM27E3Q08E93 113 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 NACAE9PAV3 2078 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 IGHV3-64A0A075B6Q5 118 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
GPC1-201ENST00000264039 FAM90A27PA6NNH2 459 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms