RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 NIPSNAP3BQ9BS92 247 aa17.07■□□□□ 0.32
UFD1-201ENST00000263202 TRBV20OR9-2A0A075B6H5 130 aa17.07■□□□□ 0.32
UFD1-201ENST00000263202 CSN1S1P47710 185 aa17.07■□□□□ 0.32
UFD1-201ENST00000263202 CNN1P51911 297 aaKnown RBP17.07■□□□□ 0.32
UFD1-201ENST00000263202 ZNF747Q9BV97 191 aa17.07■□□□□ 0.32
UFD1-201ENST00000263202 CLEC5AQ9NY25 188 aa17.07■□□□□ 0.32
UFD1-201ENST00000263202 FBN1P35555 2871 aaKnown RBP17.06■□□□□ 0.32
UFD1-201ENST00000263202 ZNF705FA8MVS1 300 aaPredicted RBP17.06■□□□□ 0.32
UFD1-201ENST00000263202 ISLRO14498 428 aa17.06■□□□□ 0.32
UFD1-201ENST00000263202 LCN12Q6JVE5 192 aa17.06■□□□□ 0.32
UFD1-201ENST00000263202 GOLT1AQ6ZVE7 132 aa17.06■□□□□ 0.32
UFD1-201ENST00000263202 TMEM158Q8WZ71 300 aa17.06■□□□□ 0.32
UFD1-201ENST00000263202 KLF12Q9Y4X4 402 aa17.06■□□□□ 0.32
UFD1-201ENST00000263202 TRAV34A0A0B4J273 112 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 PSG3Q16557 428 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 WFDC3Q8IUB2 231 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 MRPL53Q96EL3 112 aaKnown RBP17.05■□□□□ 0.32
UFD1-201ENST00000263202 C20orf173Q96LM9 149 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 ATRQ13535 2644 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 TMEM183BQ1AE95 376 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 TMEM241Q24JQ0 296 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 SAMD13Q5VXD3 122 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 TMEM61Q8N0U2 210 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 SVBPQ8N300 66 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 SDF2L1Q9HCN8 221 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 NAT8Q9UHE5 227 aa17.05■□□□□ 0.32
UFD1-201ENST00000263202 K7EQG2 157 aa17.04■□□□□ 0.32
UFD1-201ENST00000263202 DNASE2O00115 360 aaPredicted RBP17.04■□□□□ 0.32
UFD1-201ENST00000263202 TFPI2P48307 235 aa17.04■□□□□ 0.32
UFD1-201ENST00000263202 C9JCJ5 164 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 TAS2R60P59551 318 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 CD300EQ496F6 205 aaPredicted RBP17.03■□□□□ 0.32
UFD1-201ENST00000263202 RBPMS2Q6ZRY4 209 aaKnown RBP17.03■□□□□ 0.32
UFD1-201ENST00000263202 TVP23CQ96ET8 276 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 SGK494Q96LW2 274 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 IGF2BP2-AS1Q96M15 143 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 SERTM2A0A1B0GWG4 89 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 PRAC2D3DTV9 90 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 TSPAN4O14817 238 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 UBE2G1P62253 170 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 PAFAH1B2P68402 229 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 CENPWQ5EE01 88 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 FMC1Q96HJ9 113 aa17.03■□□□□ 0.32
UFD1-201ENST00000263202 IGKV2-40A0A087WW87 121 aaPredicted RBP17.02■□□□□ 0.31
UFD1-201ENST00000263202 TRAV8-1A0A0A6YYK1 113 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 PGPEP1LA6NFU8 196 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 K7EQM0 130 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 SAP30O75446 220 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 IGKV2D-40P01614 121 aaPredicted RBP17.02■□□□□ 0.31
UFD1-201ENST00000263202 IGLV2-11P01706 119 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 S100A9P06702 114 aaKnown RBP17.02■□□□□ 0.31
UFD1-201ENST00000263202 ID1P41134 155 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 FAM24BQ8N5W8 94 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 C3orf56Q8N813 242 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 TMEM75Q8N9X5 138 aa17.02■□□□□ 0.31
UFD1-201ENST00000263202 GNG4P50150 75 aa17.01■□□□□ 0.31
UFD1-201ENST00000263202 C12orf54Q6X4T0 127 aa17.01■□□□□ 0.31
UFD1-201ENST00000263202 CLRN3Q8NCR9 226 aa17.01■□□□□ 0.31
UFD1-201ENST00000263202 RPL23P62829 140 aaKnown RBP17■□□□□ 0.31
UFD1-201ENST00000263202 ZNF738Q8NE65 137 aa17■□□□□ 0.31
UFD1-201ENST00000263202 TRAV2A0A0B4J234 112 aa17■□□□□ 0.31
UFD1-201ENST00000263202 TRAV25A0A0B4J276 109 aa17■□□□□ 0.31
UFD1-201ENST00000263202 SNAPINO95295 136 aa17■□□□□ 0.31
UFD1-201ENST00000263202 PNRC1Q12796 327 aaPredicted RBP17■□□□□ 0.31
UFD1-201ENST00000263202 OCC1Q8TAD7 63 aa17■□□□□ 0.31
UFD1-201ENST00000263202 IZUMO1RA6ND01 250 aa16.99■□□□□ 0.31
UFD1-201ENST00000263202 M0R036 132 aa16.99■□□□□ 0.31
UFD1-201ENST00000263202 ATRAIDQ6UW56 229 aa16.99■□□□□ 0.31
UFD1-201ENST00000263202 LINC01551Q86U37 167 aa16.99■□□□□ 0.31
UFD1-201ENST00000263202 AURKAIP1Q9NWT8 199 aaPredicted RBP16.99■□□□□ 0.31
UFD1-201ENST00000263202 LY96Q9Y6Y9 160 aa16.99■□□□□ 0.31
UFD1-201ENST00000263202 TRBV6-1A0A0K0K1D8 114 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 RBAKDNA6NC62 111 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 IGLV2-8P01709 118 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 FLI1Q01543 452 aaPredicted RBP16.98■□□□□ 0.31
UFD1-201ENST00000263202 Q86TA4 180 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 SPATA3Q8NHX4 192 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 VGLL1Q99990 258 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 PSG8Q9UQ74 426 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 LTAP01374 205 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 IGLV1-51P01701 117 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 ZNF688P0C7X2 276 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 SNRPD3P62318 126 aaKnown RBP16.98■□□□□ 0.31
UFD1-201ENST00000263202 ADIRFQ15847 76 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 SHISA2Q6UWI4 295 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 PRNTQ86SH4 94 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 BAGE2Q86Y30 109 aa16.98■□□□□ 0.31
UFD1-201ENST00000263202 SPAG8Q99932 426 aaPredicted RBP16.98■□□□□ 0.31
UFD1-201ENST00000263202 K7EN84 100 aa16.96■□□□□ 0.31
UFD1-201ENST00000263202 ERCC8Q13216 396 aa16.96■□□□□ 0.31
UFD1-201ENST00000263202 DEFB1P60022 68 aa16.96■□□□□ 0.3
UFD1-201ENST00000263202 PSMG4Q5JS54 123 aa16.96■□□□□ 0.3
UFD1-201ENST00000263202 NHLRC2Q8NBF2 726 aa16.96■□□□□ 0.3
UFD1-201ENST00000263202 FBLL1A6NHQ2 334 aaKnown RBP16.95■□□□□ 0.3
UFD1-201ENST00000263202 OR2K2Q8NGT1 345 aa16.95■□□□□ 0.3
UFD1-201ENST00000263202 MLST8Q9BVC4 326 aa16.95■□□□□ 0.3
UFD1-201ENST00000263202 ZNF256Q9Y2P7 627 aaPredicted RBP16.95■□□□□ 0.3
UFD1-201ENST00000263202 C7orf77A4D0Y5 90 aa16.94■□□□□ 0.3
UFD1-201ENST00000263202 ZNF705DP0CH99 300 aaPredicted RBP16.94■□□□□ 0.3
UFD1-201ENST00000263202 ZNF705BP0CI00 300 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms