RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 ERCC8Q13216 396 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 TWIST1Q15672 202 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 CHCHD1Q96BP2 118 aaKnown RBP7.16□□□□□ -1.26
MSH4-201ENST00000263187 C1RLQ9NZP8 487 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 J3KRW8 73 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 HAX1O00165 279 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 CCL21O00585 134 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 NBR2O15453 112 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 RELQ04864 619 aaPredicted RBP7.16□□□□□ -1.26
MSH4-201ENST00000263187 RIGQ13278 110 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 BVES-AS1Q5T3Y7 98 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 RNF182Q8N6D2 247 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 NDFIP1Q9BT67 221 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 CSMD2Q7Z408 3487 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 PIEZO1Q92508 2521 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 TMEM189A5PLL7 270 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 K7EQM0 130 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 SPRY2O43597 315 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 SH2D1AO60880 128 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 ORM1P02763 201 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 EVI2AP22794 236 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
MSH4-201ENST00000263187 AAMDCQ9H7C9 122 aa7.16□□□□□ -1.26
MSH4-201ENST00000263187 HIVEP3Q5T1R4 2406 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 H3BRN7 92 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 OVOL3O00110 214 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 TAX1BP3O14907 124 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 SFTPCP11686 197 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 CACNG7P62955 275 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 C8orf31Q8N9H6 132 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 RAB37Q96AX2 223 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 SIGLEC8Q9NYZ4 499 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 DPM3Q9P2X0 92 aa7.15□□□□□ -1.26
MSH4-201ENST00000263187 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 GATA1P15976 413 aaPredicted RBP7.15□□□□□ -1.27
MSH4-201ENST00000263187 S100A7P31151 101 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 PLP1P60201 277 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 ECSCRQ19T08 205 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 CT83Q5H943 113 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 PRELID3AQ96N28 172 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 TTTY13Q9BZ97 58 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 ST20Q9HBF5 79 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 JKAMPQ9P055 326 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 HSPB8Q9UJY1 196 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 CBY1Q9Y3M2 126 aa7.15□□□□□ -1.27
MSH4-201ENST00000263187 K7EMI3 77 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 EGR2P11161 476 aaPredicted RBP7.14□□□□□ -1.27
MSH4-201ENST00000263187 NMUP48645 174 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 Q6ZQT7 251 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 FANCD2OSQ96PS1 177 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 ZNF747Q9BV97 191 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 GFRA4Q9GZZ7 299 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 SCRT2Q9NQ03 307 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 LINC00527Q9UJ94 153 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 UTP20O75691 2785 aaKnown RBP7.14□□□□□ -1.27
MSH4-201ENST00000263187 CREBBPQ92793 2442 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 IGHV3OR16-10A0A075B7F0 116 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 PRAC2D3DTV9 90 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 GPR183P32249 361 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 CKS2P33552 79 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 CSN1S1P47710 185 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 RHOGP84095 191 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 THYN1Q9P016 225 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 TMEM14CQ9P0S9 112 aa7.14□□□□□ -1.27
MSH4-201ENST00000263187 CRXO43186 299 aaPredicted RBP7.13□□□□□ -1.27
MSH4-201ENST00000263187 NPYP01303 97 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 OR10AG1Q8NH19 301 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 DEFB104AQ8WTQ1 72 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 C21orf62Q9NYP8 219 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 SOX21Q9Y651 276 aaPredicted RBP7.13□□□□□ -1.27
MSH4-201ENST00000263187 A0A096LNJ9 63 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 TRAV8-6A0A0B4J262 113 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 LY6LH3BQJ8 138 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 C5orf64Q2M2E5 130 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 MRPL51Q4U2R6 128 aaKnown RBP7.13□□□□□ -1.27
MSH4-201ENST00000263187 FAM162BQ5T6X4 162 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 PVRIGQ6DKI7 326 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 ARPC1AQ92747 370 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 CSPG4Q6UVK1 2322 aa7.13□□□□□ -1.27
MSH4-201ENST00000263187 MFAP4P55083 255 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 PSG9Q00887 426 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 PET117Q6UWS5 81 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 TNFRSF14Q92956 283 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 DKK2Q9UBU2 259 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 LINC01548A6NM66 108 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 F8W735 103 aaPredicted RBP7.12□□□□□ -1.27
MSH4-201ENST00000263187 MRPS12O15235 138 aaKnown RBP7.12□□□□□ -1.27
MSH4-201ENST00000263187 PCP2Q8IVA1 136 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 PIP4P2Q8N4L2 257 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 IGHV2-70DA0A0C4DH43 119 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 K7EP13 123 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 RBX1P62877 108 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 CFHR4Q92496 578 aa7.12□□□□□ -1.27
MSH4-201ENST00000263187 G3V318 75 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 ZFP36P26651 326 aaKnown RBP7.11□□□□□ -1.27
MSH4-201ENST00000263187 LINC01545Q5VT33 79 aa7.11□□□□□ -1.27
MSH4-201ENST00000263187 VMO1Q7Z5L0 202 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms