RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 C8orf88P0DMB2 117 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 LINC00694P0DN24 101 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 FKBP2P26885 142 aaKnown RBP6.79□□□□□ -1.32
LDB3-201ENST00000263066 GRNP28799 593 aaKnown RBP6.79□□□□□ -1.32
LDB3-201ENST00000263066 TWIST1Q15672 202 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 COQ2Q96H96 371 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 DKK2Q9UBU2 259 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 POLDIP2Q9Y2S7 368 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 ADAMTS20P59510 1910 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 A0A1B0GUT8 65 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 E9PLN8 166 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 IGHV4-39P01824 125 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 KLF5Q13887 457 aaPredicted RBP6.79□□□□□ -1.32
LDB3-201ENST00000263066 GAGE2AQ6NT46 116 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 MYOZ3Q8TDC0 251 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 CHCHD5Q9BSY4 110 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 OR2H1Q9GZK4 316 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 HIGD1AQ9Y241 93 aa6.79□□□□□ -1.32
LDB3-201ENST00000263066 AREGP15514 252 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 Q6ZR03 302 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 ATP5L2Q7Z4Y8 100 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 FGFBP3Q8TAT2 258 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 MGST2Q99735 147 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 KLK15Q9H2R5 256 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 IGKV1-27A0A075B6S5 117 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 TRAV4A0A0B4J268 109 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 C17orf98A8MV24 154 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 IGKV1-39P01597 117 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 IGHV3-48P01763 117 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 IGKV1D-39P04432 117 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 MAPK1IP1LQ8NDC0 245 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 S1PR3Q99500 378 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 TRBV25-1A0A075B6N4 114 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 ATP5LO75964 103 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 IGKCP01834 107 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 TFF1P04155 84 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 PYYP10082 97 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 PMVKQ15126 192 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 Q6ZS92 163 aa6.78□□□□□ -1.32
LDB3-201ENST00000263066 NPIPB11E5RHQ5 1161 aa6.77□□□□□ -1.32
LDB3-201ENST00000263066 ZNF474Q6S9Z5 364 aaPredicted RBP6.77□□□□□ -1.32
LDB3-201ENST00000263066 C10orf35Q96D05 121 aa6.77□□□□□ -1.32
LDB3-201ENST00000263066 FAM106CPP0CH98 169 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 HOXA4Q00056 320 aaPredicted RBP6.77□□□□□ -1.33
LDB3-201ENST00000263066 FAM106AQ4KMX7 169 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 MOGAT3Q86VF5 341 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 MDS2Q8NDY4 140 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 IGHV3OR16-10A0A075B7F0 116 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 NPFFO15130 113 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 GDF5OSQ5U4N7 250 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 PCSK4Q6UW60 755 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 VKORC1Q9BQB6 163 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 PROK2Q9HC23 129 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 TCF19Q9Y242 345 aa6.77□□□□□ -1.33
LDB3-201ENST00000263066 E9PLD3 99 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 COX6B1P14854 86 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 POU2AF1Q16633 256 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 CDIP1Q9H305 208 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 SSUH2Q9Y2M2 353 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 D6R8Y8 96 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 DPM2O94777 84 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 IGHV1-2P23083 117 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 SRSF1Q07955 248 aaKnown RBP eCLIP6.76□□□□□ -1.33
LDB3-201ENST00000263066 C10orf113Q5VZT2 155 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 NTN5Q8WTR8 489 aaPredicted RBP6.76□□□□□ -1.33
LDB3-201ENST00000263066 GGTLC3B5MD39 225 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 C10orf142B7Z368 130 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 CD40P25942 277 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 LEPP41159 167 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 FGF12P61328 243 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 TNFAIP6P98066 277 aaPredicted RBP6.76□□□□□ -1.33
LDB3-201ENST00000263066 ANKRD29Q8N6D5 301 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 NRGNQ92686 78 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 LINC00312Q9Y6C7 94 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 IGKV1-6A0A0C4DH72 117 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 LINC00205P59089 165 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 Q71RC1 249 aaPredicted RBP6.76□□□□□ -1.33
LDB3-201ENST00000263066 GGNQ86UU5 652 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 NABP1Q96AH0 204 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 DUX5Q96PT3 197 aa6.76□□□□□ -1.33
LDB3-201ENST00000263066 TANC2Q9HCD6 1990 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 SETXQ7Z333 2677 aaKnown RBP6.75□□□□□ -1.33
LDB3-201ENST00000263066 NCOA6Q14686 2063 aaPredicted RBP6.75□□□□□ -1.33
LDB3-201ENST00000263066 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 M0R3E3 92 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 BSPH1Q075Z2 132 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 LGALS9BQ3B8N2 356 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 SP5Q6BEB4 398 aaPredicted RBP6.75□□□□□ -1.33
LDB3-201ENST00000263066 LGALS9CQ6DKI2 356 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 FAM19A5Q7Z5A7 132 aaPredicted RBP6.75□□□□□ -1.33
LDB3-201ENST00000263066 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 ORMDL3Q8N138 153 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 Q9UFV3 132 aa6.75□□□□□ -1.33
LDB3-201ENST00000263066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 503.6 ms