RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 TIMD4Q96H15 378 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 AP5S1Q9NUS5 200 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 AKAP6Q13023 2319 aa13.05□□□□□ -0.32
PDE4C-201ENST00000262805 SERTM2A0A1B0GWG4 89 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 OR5AL1P0C617 328 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 EGR2P11161 476 aaPredicted RBP13.04□□□□□ -0.32
PDE4C-201ENST00000262805 ZFP36P26651 326 aaKnown RBP13.04□□□□□ -0.32
PDE4C-201ENST00000262805 IFI27P40305 119 aaPredicted RBP13.04□□□□□ -0.32
PDE4C-201ENST00000262805 TTC9CQ8N5M4 171 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 SMAD5-AS1Q9Y6J3 95 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 LOC389332A0A1B0GUA5 103 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 CT45A10P0DMU9 189 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 FOXE3Q13461 319 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 ERASQ7Z444 233 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 AMN1Q8IY45 258 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 COX11Q9Y6N1 276 aa13.04□□□□□ -0.32
PDE4C-201ENST00000262805 A0A096LNJ9 63 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 D6R8Y8 96 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 NDUFS7O75251 213 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 ZNF80P51504 273 aaPredicted RBP13.03□□□□□ -0.32
PDE4C-201ENST00000262805 PDE6HQ13956 83 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 IGHG4P01861 327 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 CTSGP08311 255 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 FXYD7P58549 80 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 PET117Q6UWS5 81 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 Q8N6K4 173 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 PRSS3P2Q8NHM4 247 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 ORAOV1Q8WV07 137 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 VGLL1Q99990 258 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 ZNF747Q9BV97 191 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 SCRT2Q9NQ03 307 aa13.03□□□□□ -0.32
PDE4C-201ENST00000262805 TMEM189A5PLL7 270 aa13.02□□□□□ -0.32
PDE4C-201ENST00000262805 ZNF48Q96MX3 618 aaPredicted RBP13.02□□□□□ -0.32
PDE4C-201ENST00000262805 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.32
PDE4C-201ENST00000262805 A0A1W2PPR1 153 aa13.02□□□□□ -0.33
PDE4C-201ENST00000262805 LINC01545Q5VT33 79 aa13.02□□□□□ -0.33
PDE4C-201ENST00000262805 IGHV7-81A0A0B4J1V7 117 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
PDE4C-201ENST00000262805 ZNF493Q6ZR52 646 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 FA2HQ7L5A8 372 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 ZNF575Q86XF7 245 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 PRR25Q96S07 402 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 CSN1S1P47710 185 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 SLC25A34Q6PIV7 304 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 SIGLEC8Q9NYZ4 499 aa13.01□□□□□ -0.33
PDE4C-201ENST00000262805 SMKR1H3BMG3 65 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 NUDT3O95989 172 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 TMEM11P17152 192 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 Q6AWC8 147 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 A0A1B0GW15 77 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 PTTG1IPP53801 180 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 FAM104BQ5XKR9 115 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 PIP4P2Q8N4L2 257 aa13□□□□□ -0.33
PDE4C-201ENST00000262805 HSBP1L1C9JCN9 74 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 PSG9Q00887 426 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 ZNF738Q8NE65 137 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 SNAI2O43623 268 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 RPL7P18124 248 aaKnown RBP12.99□□□□□ -0.33
PDE4C-201ENST00000262805 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
PDE4C-201ENST00000262805 OR10AG1Q8NH19 301 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 PRELID3AQ96N28 172 aa12.99□□□□□ -0.33
PDE4C-201ENST00000262805 HIVEP3Q5T1R4 2406 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 A0A087X0K7 114 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 BVES-AS1Q5T3Y7 98 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 Q8N9W7 124 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 OR8A1Q8NGG7 326 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 TMEM190Q8WZ59 177 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 U3KQK5 164 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 CCDC144NLQ6NUI1 221 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 MSRB1Q9NZV6 116 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
PDE4C-201ENST00000262805 PRAC2D3DTV9 90 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 GPR183P32249 361 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 ERCC8Q13216 396 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 EBI3Q14213 229 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 THYN1Q9P016 225 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 IGHV3-66A0A0C4DH42 116 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 TCTAP57738 103 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 UBE2V1Q13404 147 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 ECSCRQ19T08 205 aa12.97□□□□□ -0.33
PDE4C-201ENST00000262805 GAS8-AS1O95177 125 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 S100A7AQ86SG5 101 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 RNF182Q8N6D2 247 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 AJUBAQ96IF1 538 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 PSMG3-AS1Q96PY0 264 aa12.96□□□□□ -0.33
PDE4C-201ENST00000262805 NPYP01303 97 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 TWIST1Q15672 202 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 C15orf32Q32M92 178 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 ORMDL3Q8N138 153 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 SIRPDQ9H106 197 aa12.96□□□□□ -0.34
PDE4C-201ENST00000262805 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 LINC01548A6NM66 108 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
PDE4C-201ENST00000262805 FER1L6-AS1Q8NA97 138 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms