RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 GATD1Q8NB37 220 aa6.59□□□□□ -1.35
PTPN3-201ENST00000262539 C10orf105Q8TEF2 133 aa6.59□□□□□ -1.35
PTPN3-201ENST00000262539 ZNF492Q9P255 531 aa6.59□□□□□ -1.35
PTPN3-201ENST00000262539 MYO7BQ6PIF6 2116 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 TRBV6-1A0A0K0K1D8 114 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 TOMM40O96008 361 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 APOHP02749 345 aaPredicted RBP6.59□□□□□ -1.36
PTPN3-201ENST00000262539 IGKV1-16P04430 117 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 SMIM13P0DJ93 91 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 ATOH7Q8N100 152 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 RNF182Q8N6D2 247 aa6.59□□□□□ -1.36
PTPN3-201ENST00000262539 PPIFP30405 207 aaKnown RBP6.58□□□□□ -1.36
PTPN3-201ENST00000262539 ODF3L1Q8IXM7 274 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 TRBV7-1A0A0A6YYK4 115 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 IGHV1-69DA0A0B4J2H0 117 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 IGLC7A0M8Q6 106 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 WISP2O76076 250 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 IGHV1-69P01742 117 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 C9orf139Q6ZV77 190 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 TCF23Q7RTU1 214 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 MCRIP2Q9BUT9 160 aaKnown RBP6.58□□□□□ -1.36
PTPN3-201ENST00000262539 OVOL1O14753 267 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 RUSC1-AS1Q66K80 236 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 PRSS57Q6UWY2 283 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 MGST2Q99735 147 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
PTPN3-201ENST00000262539 APOMO95445 188 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 APOC4P55056 127 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 BRWD1-AS2P59051 145 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 RPL23P62829 140 aaKnown RBP6.58□□□□□ -1.36
PTPN3-201ENST00000262539 SHANK2-AS3Q9BTD1 123 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 LENEPQ9Y5L5 61 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 MYO18BQ8IUG5 2567 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 EVI2AP22794 236 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 RPL15P61313 204 aaKnown RBP6.58□□□□□ -1.36
PTPN3-201ENST00000262539 GNG5P63218 68 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 WT1-ASQ06250 92 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 OR2K2Q8NGT1 345 aa6.58□□□□□ -1.36
PTPN3-201ENST00000262539 PKD1L2Q7Z442 2459 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 PRSS46E5RG02 174 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 OVOL3O00110 214 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 NDPQ00604 133 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 RARRES2Q99969 163 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 HBDP02042 147 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 GATA2P23769 480 aaPredicted RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 ANXA2RQ3ZCQ2 193 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 ASCL2Q99929 193 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 BPESC1Q9GZL8 116 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 TRAV2A0A0B4J234 112 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 LHFPL4Q7Z7J7 247 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 LINC01551Q86U37 167 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 MRPL53Q96EL3 112 aaKnown RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 SIRPDQ9H106 197 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 RPP21Q9H633 154 aaKnown RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 CHD8Q9HCK8 2581 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 NOTCH2Q04721 2471 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 COLCA2A8K830 154 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 RPL36AP83881 106 aaKnown RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 RPL36ALQ969Q0 106 aaKnown RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 IL36BQ9NZH7 164 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 GZMBP10144 247 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 LAMTOR3Q9UHA4 124 aa6.57□□□□□ -1.36
PTPN3-201ENST00000262539 GOLGB1Q14789 3259 aaKnown RBP6.57□□□□□ -1.36
PTPN3-201ENST00000262539 FABP5P3A8MUU1 101 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 FOXA3P55318 350 aaPredicted RBP6.56□□□□□ -1.36
PTPN3-201ENST00000262539 SS18Q15532 418 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 SLC25A2Q9BXI2 301 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 FCN3O75636 299 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 PMCHL1Q16048 86 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 C15orf32Q32M92 178 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 SLC25A34Q6PIV7 304 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 C5orf30Q96GV9 206 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 LINC01619G3V211 115 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF561-AS1K7EIQ3 104 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 PAX4O43316 350 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 ERCC8Q13216 396 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 MIR17HGQ75NE6 70 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 PMCHL2Q9BQD1 86 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 EPDR1Q9UM22 224 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 MMP23AO75900 390 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 GFRA4Q9GZZ7 299 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 ZGRF1Q86YA3 2104 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 IGLC1P0CG04 106 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 LOXL1Q08397 574 aaPredicted RBP6.56□□□□□ -1.36
PTPN3-201ENST00000262539 PSG1P11464 419 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 LMO4P61968 165 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 AJUBAQ96IF1 538 aa6.56□□□□□ -1.36
PTPN3-201ENST00000262539 TRAV3A0A0B4J244 114 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 CA1P00915 261 aaPredicted RBP6.55□□□□□ -1.36
PTPN3-201ENST00000262539 RMI2Q96E14 147 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 HTTP42858 3142 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 A0A1B0GUT8 65 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 GGTLC3B5MD39 225 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 LY6LH3BQJ8 138 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 ELANEP08246 267 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 SYNJ2BPP57105 145 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 RFNGQ9Y644 331 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 CBLN1P23435 193 aa6.55□□□□□ -1.36
PTPN3-201ENST00000262539 ZNF295-AS1Q8N0V1 137 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms