RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 VMO1Q7Z5L0 202 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 PRSS3P2Q8NHM4 247 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 TMEM191AQ9H0A3 160 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 D6R8Y8 96 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 SH2D1AO60880 128 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 NDUFS7O75251 213 aa12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 RELQ04864 619 aaPredicted RBP12.78□□□□□ -0.36
TM9SF1-201ENST00000261789 ZFP36P26651 326 aaKnown RBP12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 FOXE3Q13461 319 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 FBXL19-AS1Q494R0 122 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 ST20Q9HBF5 79 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 NPIPB5A8MRT5 1133 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 VGLL1Q99990 258 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 COX11Q9Y6N1 276 aa12.77□□□□□ -0.37
TM9SF1-201ENST00000261789 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 TMEM189A5PLL7 270 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 SNAI2O43623 268 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF80P51504 273 aaPredicted RBP12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 PTTG1IPP53801 180 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 HSPB8Q9UJY1 196 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 SMAD5-AS1Q9Y6J3 95 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 NUDT3O95989 172 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 CTSGP08311 255 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 CSN1S1P47710 185 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 TTC9CQ8N5M4 171 aa12.76□□□□□ -0.37
TM9SF1-201ENST00000261789 MAP1AP78559 2803 aaPredicted RBP12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 HSBP1L1C9JCN9 74 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 SMKR1H3BMG3 65 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 M0R1W7 72 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 EGR2P11161 476 aaPredicted RBP12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 TCTAP57738 103 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 C21orf62-AS1Q17RA5 79 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 PET117Q6UWS5 81 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 ORAOV1Q8WV07 137 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF747Q9BV97 191 aa12.75□□□□□ -0.37
TM9SF1-201ENST00000261789 A0A096LNJ9 63 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 PDE6HQ13956 83 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 SLC25A34Q6PIV7 304 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 SCRT2Q9NQ03 307 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 IGHG4P01861 327 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 TMEM11P17152 192 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 C11orf71Q6IPW1 123 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 PRR25Q96S07 402 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 SIGLEC8Q9NYZ4 499 aa12.74□□□□□ -0.37
TM9SF1-201ENST00000261789 IGHV7-81A0A0B4J1V7 117 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 A0A1W2PPR1 153 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF738Q8NE65 137 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 OR8A1Q8NGG7 326 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 A0A087X0K7 114 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 IGHV3-66A0A0C4DH42 116 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 LINC01545Q5VT33 79 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 GATD1Q8NB37 220 aa12.73□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF493Q6ZR52 646 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 Q8N6K4 173 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 PRELID3AQ96N28 172 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 RAXQ9Y2V3 346 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 IGHV3OR16-13A0A075B7E8 117 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 IGHV3-74A0A0B4J1X5 117 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 RPL7P18124 248 aaKnown RBP12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 GPR183P32249 361 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 PSG9Q00887 426 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 ERCC8Q13216 396 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 FAM104BQ5XKR9 115 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 Q6AWC8 147 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF575Q86XF7 245 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 MSRB1Q9NZV6 116 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 RABAC1Q9UI14 185 aa12.72□□□□□ -0.37
TM9SF1-201ENST00000261789 TWIST1Q15672 202 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 ECSCRQ19T08 205 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 THYN1Q9P016 225 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 CBY1Q9Y3M2 126 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 A0A1B0GW15 77 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 BVES-AS1Q5T3Y7 98 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 RNF182Q8N6D2 247 aa12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.37
TM9SF1-201ENST00000261789 HIVEP3Q5T1R4 2406 aa12.71□□□□□ -0.38
TM9SF1-201ENST00000261789 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 UBE2V1Q13404 147 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 CCDC144NLQ6NUI1 221 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 PIP4P2Q8N4L2 257 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 Q8N9W7 124 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 C15orf32Q32M92 178 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 S100A7AQ86SG5 101 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 WFDC3Q8IUB2 231 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 CHD8Q9HCK8 2581 aa12.7□□□□□ -0.38
TM9SF1-201ENST00000261789 LINC01548A6NM66 108 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 PPIFP30405 207 aaKnown RBP12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 ORMDL3Q8N138 153 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 NCOR2Q9Y618 2525 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 IGHV3-49A0A0A0MS15 119 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 NPYP01303 97 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 ORM1P02763 201 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 CLEC3BP05452 202 aa12.69□□□□□ -0.38
TM9SF1-201ENST00000261789 SAPCD1Q5SSQ6 148 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms