RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 DKK2Q9UBU2 259 aa13.02□□□□□ -0.32
SREBF1-201ENST00000261646 DNAH14Q0VDD8 3507 aa13.02□□□□□ -0.32
SREBF1-201ENST00000261646 MRPL51Q4U2R6 128 aaKnown RBP13.02□□□□□ -0.33
SREBF1-201ENST00000261646 CLEC19AQ6UXS0 136 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 TNFRSF6BO95407 300 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 IGLC1P0CG04 106 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 GAGE2BQ13066 116 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 GAGE2EQ4V326 116 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 C8orf49Q96NF6 230 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 GAGE2DQ9UEU5 116 aa13.02□□□□□ -0.33
SREBF1-201ENST00000261646 ZNF883P0CG24 379 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 IGHV1-8P0DP01 117 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 PF4V1P10720 104 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 ORMDL2Q53FV1 153 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 FAM159AQ6UWV7 190 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 VGLL1Q99990 258 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 RNF114Q9Y508 228 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 CEP295Q9C0D2 2601 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 IGKV1OR2-108A0A075B7D4 117 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 CDX4O14627 284 aaPredicted RBP13.01□□□□□ -0.33
SREBF1-201ENST00000261646 ZFAND6Q6FIF0 208 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 WFDC12Q8WWY7 111 aa13.01□□□□□ -0.33
SREBF1-201ENST00000261646 GEMIN7Q9H840 131 aaKnown RBP13.01□□□□□ -0.33
SREBF1-201ENST00000261646 IGHV4-39P01824 125 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 FAM208BQ5VWN6 2430 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 LINC01559Q495D7 138 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 Q8TCH9 128 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 TPSG1Q9NRR2 321 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 TLN1Q9Y490 2541 aaKnown RBP13□□□□□ -0.33
SREBF1-201ENST00000261646 KMT2EQ8IZD2 1858 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 PSMB11A5LHX3 300 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 NPYP01303 97 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 LYPD1Q8N2G4 141 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 IGF2BP2-AS1Q96M15 143 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 DYSFO75923 2080 aa13□□□□□ -0.33
SREBF1-201ENST00000261646 IGHV1-3A0A0C4DH29 117 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 CTRLP40313 264 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 FAM120AOSQ5T036 256 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 ATP6V0BQ99437 205 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 SHANK2-AS3Q9BTD1 123 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 ADIPOQQ15848 244 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 POU2AF1Q16633 256 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 GLMPQ8WWB7 406 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 ANKHD1Q8IWZ3 2542 aaKnown RBP12.99□□□□□ -0.33
SREBF1-201ENST00000261646 PPP1R17O96001 155 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 ZNF562Q6V9R5 426 aa12.99□□□□□ -0.33
SREBF1-201ENST00000261646 OTOGLQ3ZCN5 2332 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 TRBV19A0A075B6N1 114 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 PLNP26678 52 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 EEF1AKMT3Q96AZ1 226 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 TSPAN13O95857 204 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 ID1P41134 155 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 BRWD1-AS2P59051 145 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 LINC01545Q5VT33 79 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 LYPD2Q6UXB3 125 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 EML5Q05BV3 1969 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 B9A039 149 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 F8W1H4 67 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 CNTFRP26992 372 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 ATP5G2Q06055 141 aa12.98□□□□□ -0.33
SREBF1-201ENST00000261646 NPIPB6E9PJ23 425 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 H7C1H1 209 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 NDUFS7O75251 213 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 APOBEC3AP31941 199 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-201ENST00000261646 DIAPH2-AS1Q14236 149 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 SH2D6Q7Z4S9 175 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 SYT8Q8NBV8 401 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 LINC01560Q8TB33 94 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 FAM167A-AS1Q96KT0 104 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 CFAP54Q96N23 3096 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 P0C879 139 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 PAPPA-AS1Q5QFB9 102 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 GTSF1Q8WW33 167 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 SLC50A1Q9BRV3 221 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 LTAP01374 205 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 PATE2Q6UY27 113 aa12.97□□□□□ -0.33
SREBF1-201ENST00000261646 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
SREBF1-201ENST00000261646 ACACBO00763 2458 aa12.96□□□□□ -0.33
SREBF1-201ENST00000261646 IGHV3-64A0A075B6Q5 118 aa12.96□□□□□ -0.33
SREBF1-201ENST00000261646 RNASE4P34096 147 aaKnown RBP12.96□□□□□ -0.33
SREBF1-201ENST00000261646 TNFRSF14Q92956 283 aa12.96□□□□□ -0.33
SREBF1-201ENST00000261646 MRPL35Q9NZE8 188 aaKnown RBP12.96□□□□□ -0.33
SREBF1-201ENST00000261646 TTTY13Q9BZ97 58 aa12.96□□□□□ -0.33
SREBF1-201ENST00000261646 DSCAML1Q8TD84 2053 aa12.96□□□□□ -0.33
SREBF1-201ENST00000261646 TMEM178BH3BS89 294 aa12.96□□□□□ -0.34
SREBF1-201ENST00000261646 PRSS46E5RG02 174 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 TMEM75Q8N9X5 138 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 C17orf77Q96MU5 243 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 WISP2O76076 250 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 NPFFR1Q9GZQ6 430 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 IGF2RP11717 2491 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 LINC01549A6NIU2 74 aa12.95□□□□□ -0.34
SREBF1-201ENST00000261646 K7EMI3 77 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms