RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 LINC00574Q9H8X3 128 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 EDA2RQ9HAV5 297 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF25P17030 456 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF493Q6ZR52 646 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 LY6G5BQ8NDX9 201 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 K7EMT4 169 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PSPNO60542 156 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 LEAP2Q969E1 77 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 RCHY1Q96PM5 261 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 H3BMM0 161 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 H3BRN7 92 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 CD33P20138 364 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 KLF17Q5JT82 389 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PRO1933Q9H354 126 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 TMEM160Q9NX00 188 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 TSSC4Q9Y5U2 329 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-202ENST00000261517 APELAP0DMC3 54 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 INAFM2P0DMQ5 153 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF329Q86UD4 541 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 VPREB3Q9UKI3 123 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 C15orf65H3BRN8 121 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 LEPROTO15243 131 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 PROK2Q9HC23 129 aa3.49□□□□□ -1.85
VPS13C-202ENST00000261517 ABCA12Q86UK0 2595 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 IGHV3-21A0A0B4J1V1 117 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 H3BVH4 76 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 SLC17A3O00476 420 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 LGALS1P09382 135 aaKnown RBP3.48□□□□□ -1.85
VPS13C-202ENST00000261517 SAA4P35542 130 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 OCC1Q8TAD7 63 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 ODF3Q96PU9 254 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 CKS1BP61024 79 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 PRSS57Q6UWY2 283 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 ORAOV1Q8WV07 137 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 TFPI2P48307 235 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 SSBP4Q9BWG4 385 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-202ENST00000261517 PRR14LQ5THK1 2151 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 IGHV2-5P01817 119 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 CCL25O15444 150 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 ATP5G3P48201 142 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 NIT1Q86X76 327 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 CPAMD8Q8IZJ3 1885 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 PCNX3Q9H6A9 2034 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 TRBV19A0A075B6N1 114 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 TRAV2A0A0B4J234 112 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 SMIM27A0A1W2PRY6 76 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 GGTLC3B5MD39 225 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 H3BUX3 64 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HOXA3O43365 443 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-202ENST00000261517 CD300CQ08708 224 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 RPP25LQ8N5L8 163 aaKnown RBP3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BKO60814 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 NCR2O95944 276 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BJP06899 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BOP23527 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BBP33778 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BDP58876 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BCP62807 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST2H2BEQ16778 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BHQ93079 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BNQ99877 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 HIST1H2BMQ99879 126 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 FGFBP3Q8TAT2 258 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 Q8N8P6 123 aa3.48□□□□□ -1.85
VPS13C-202ENST00000261517 PTPRSQ13332 1948 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 M0R2P5 195 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 CRXO43186 299 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 TNFRSF6BO95407 300 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF134P52741 427 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 C1orf147Q96MC9 270 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 KLHDC3Q9BQ90 382 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 A0A087WX48 190 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 I3L3M4 83 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 SERF1AO75920 110 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 C10orf126Q8N4M7 172 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 AJUBAQ96IF1 538 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 MED19A0JLT2 244 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 LYPD6BQ8NI32 183 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 IGKV3-7A0A075B6H7 116 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 A0A087WV48 116 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 PRSS47A8MTI9 375 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 CDKN1BP46527 198 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 SRRM4A7MD48 611 aaKnown RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 PAX2Q02962 417 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 WFDC1Q9HC57 220 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 FLNBO75369 2602 aaKnown RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 SH2D1AO60880 128 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 FAM219BQ5XKK7 198 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 C11orf44Q8N8P7 122 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 ZNF462Q96JM2 2506 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 J3KRW8 73 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 EGR1P18146 543 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 LOXP28300 417 aaPredicted RBP3.47□□□□□ -1.85
VPS13C-202ENST00000261517 GLMPQ8WWB7 406 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 RHPN1-AS1Q9BWJ2 59 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 KLF12Q9Y4X4 402 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 A0A1W2PPI3 338 aa3.47□□□□□ -1.85
VPS13C-202ENST00000261517 NUP35Q8NFH5 326 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms