RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FOXC2Q99958 501 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 ANAPC13Q9BS18 74 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 BDP1A6H8Y1 2624 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 MAP1AP78559 2803 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-201ENST00000261443 PLXNB1O43157 2135 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 CACNA1HO95180 2353 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 TMEM8BA6NDV4 472 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 CECR9P0C854 216 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 XGP55808 180 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 MAPKAPK5-AS1Q8N8E1 139 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 MAP1LC3AQ9H492 121 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 RPUSD1Q9UJJ7 312 aaKnown RBP5.72□□□□□ -1.49
CSDE1-201ENST00000261443 PCNX1Q96RV3 2341 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 IGKV3-15P01624 115 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 MEOX1P50221 254 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 TWIST1Q15672 202 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 SPRNQ5BIV9 151 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 GLMPQ8WWB7 406 aa5.72□□□□□ -1.49
CSDE1-201ENST00000261443 RALYQ9UKM9 306 aaKnown RBP5.72□□□□□ -1.49
CSDE1-201ENST00000261443 ASH1LQ9NR48 2969 aaKnown RBP5.71□□□□□ -1.49
CSDE1-201ENST00000261443 A0A1W2PPI3 338 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 MBNL2Q5VZF2 373 aaKnown RBP5.71□□□□□ -1.49
CSDE1-201ENST00000261443 LCNL1Q6ZST4 164 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 ZNF833PQ6ZTB9 187 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 DEFB108BQ8NET1 73 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 OR4C13Q8NGP0 309 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 ATP6V0E2Q8NHE4 81 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 C8orf49Q96NF6 230 aa5.71□□□□□ -1.49
CSDE1-201ENST00000261443 SLC25A39Q9BZJ4 359 aaPredicted RBP5.71□□□□□ -1.49
CSDE1-201ENST00000261443 TRAV40A0A0B4J280 105 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 ATP5LO75964 103 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 CRYGCP07315 174 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 APELAP0DMC3 54 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 HLA-DRB4P13762 266 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 IGFBP4P22692 258 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 GAGE5Q13069 117 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 GAGE6Q13070 117 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 NFE4Q86UQ8 179 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 C17orf77Q96MU5 243 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 ZNF71Q9NQZ8 489 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-201ENST00000261443 PGPEP1Q9NXJ5 209 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 TMEM14CQ9P0S9 112 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 HLA-DRB4X5D2U9 266 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 CADP27708 2225 aa5.71□□□□□ -1.5
CSDE1-201ENST00000261443 INTS1Q8N201 2190 aaKnown RBP5.71□□□□□ -1.5
CSDE1-201ENST00000261443 FHL3Q13643 280 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 CFAP126Q5VTH2 177 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 Q6ZT83 130 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 SPRY3O43610 288 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 C6orf15Q6UXA7 325 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-201ENST00000261443 CNEP1R1Q8N9A8 125 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 SPRR3Q9UBC9 169 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 TRBV19A0A075B6N1 114 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 TRGV5A0A0B4J1U4 118 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 HOXA3O43365 443 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-201ENST00000261443 LHBP01229 141 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 SMCPP49901 116 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-201ENST00000261443 Q6ZS92 163 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 DLX4Q92988 240 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-201ENST00000261443 CCL13Q99616 98 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 NGBQ9NPG2 151 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 TPSG1Q9NRR2 321 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 ABCA1O95477 2261 aa5.7□□□□□ -1.5
CSDE1-201ENST00000261443 NCBP2LA6PVI3 153 aaKnown RBP5.69□□□□□ -1.5
CSDE1-201ENST00000261443 B5MCH6 92 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 NTN3O00634 580 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-201ENST00000261443 TM4SF5O14894 197 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 SH2D1AO60880 128 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 IL4P05112 153 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 TMEM30BQ3MIR4 351 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 FAM216BQ8N7L0 139 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 TMEM158Q8WZ71 300 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 TMEM133Q9H2Q1 129 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
CSDE1-201ENST00000261443 MRPL35Q9NZE8 188 aaKnown RBP5.69□□□□□ -1.5
CSDE1-201ENST00000261443 PRSS29PA6NIE9 313 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 PSMB2P49721 201 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 VMA21Q3ZAQ7 101 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 LINC01559Q495D7 138 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 MORN3Q6PF18 240 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-201ENST00000261443 RPEQ96AT9 228 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 LINC00574Q9H8X3 128 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 UFC1Q9Y3C8 167 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 TRBV7-3A0A075B6L6 115 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 M0R3E3 92 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 LAMTOR5O43504 91 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 IGLV2-23P01705 113 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 RBP4P02753 201 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 ZFAND6Q6FIF0 208 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 SIGLEC15Q6ZMC9 328 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 PTH2Q96A98 100 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 GAFA1Q96PS6 74 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 SCNM1Q9BWG6 230 aa5.69□□□□□ -1.5
CSDE1-201ENST00000261443 RAI1Q7Z5J4 1906 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-201ENST00000261443 IGHV1-18A0A0C4DH31 117 aa5.68□□□□□ -1.5
CSDE1-201ENST00000261443 LOC107984156A0A0G2JMH3 177 aa5.68□□□□□ -1.5
CSDE1-201ENST00000261443 GAS8-AS1O95177 125 aa5.68□□□□□ -1.5
CSDE1-201ENST00000261443 TNFRSF6BO95407 300 aa5.68□□□□□ -1.5
CSDE1-201ENST00000261443 THBDP07204 575 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms