RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 OR10J6PQ8NGY7 276 aa13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 SAT2Q96F10 170 aaPredicted RBP13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 WDR83OSQ9Y284 106 aa13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 TIMM8BQ9Y5J9 83 aaPredicted RBP13.35□□□□□ -0.27
TM6SF1-201ENST00000258909 IGSF23A1L1A6 192 aa13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 CBY3A6NI87 242 aa13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 PVALBP20472 110 aaPredicted RBP13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 RAB32Q13637 225 aa13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 GFI1BQ5VTD9 330 aa13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 RNASE8Q8TDE3 154 aaKnown RBP13.34□□□□□ -0.27
TM6SF1-201ENST00000258909 H7BYZ3 331 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 BAXQ07812 192 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 TMEM252Q8N6L7 170 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 LYRM2Q9NU23 88 aaPredicted RBP13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 ZNF586Q9NXT0 402 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 NDUFA13Q9P0J0 144 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 PXMP4Q9Y6I8 212 aa13.33□□□□□ -0.28
TM6SF1-201ENST00000258909 FAM240BA0A1B0GVZ2 78 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 SULT1A1P50225 295 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 IL15RAQ13261 267 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 VWC2Q2TAL6 325 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 OR1L4Q8NGR5 311 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 TMEM263Q8WUH6 116 aaKnown RBP13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 CCDC32Q9BV29 185 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 SLC39A9Q9NUM3 307 aa13.32□□□□□ -0.28
TM6SF1-201ENST00000258909 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
TM6SF1-201ENST00000258909 C1orf134Q5TEV5 83 aa13.31□□□□□ -0.28
TM6SF1-201ENST00000258909 ZNF493Q6ZR52 646 aa13.31□□□□□ -0.28
TM6SF1-201ENST00000258909 TRAV12-3A0A0B4J271 114 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 FGF7P21781 194 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 S100A11P31949 105 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 RPL29P47914 159 aaKnown RBP13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 SOHLH1Q5JUK2 328 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 STX12Q86Y82 276 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 RNF141Q8WVD5 230 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 PFDN5Q99471 154 aa13.3□□□□□ -0.28
TM6SF1-201ENST00000258909 GUK1Q16774 197 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 CCDC28AQ8IWP9 274 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 RYR1P21817 5038 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 NPIPB6E9PJ23 425 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 M0R3E3 92 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 FAM3BP58499 235 aaPredicted RBP13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 HBG1P69891 147 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 HBG2P69892 147 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 OR5I1Q13606 314 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 GCSAMLQ5JQS6 135 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 ZNRF2Q8NHG8 242 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
TM6SF1-201ENST00000258909 GAGE12BA1L429 117 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 GAGE7O76087 117 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 SIX6O95475 246 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 GAGE12FP0CL80 117 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 GAGE12GP0CL81 117 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 GAGE12IP0CL82 117 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 MED14OSP0DP75 135 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 PYYP10082 97 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 ERCC8Q13216 396 aa13.28□□□□□ -0.28
TM6SF1-201ENST00000258909 MUC4Q99102 2169 aa13.27□□□□□ -0.28
TM6SF1-201ENST00000258909 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.29
TM6SF1-201ENST00000258909 LEPP41159 167 aa13.27□□□□□ -0.29
TM6SF1-201ENST00000258909 CCL18P55774 89 aa13.27□□□□□ -0.29
TM6SF1-201ENST00000258909 MZT2BQ6NZ67 158 aa13.27□□□□□ -0.29
TM6SF1-201ENST00000258909 ZNF575Q86XF7 245 aa13.27□□□□□ -0.29
TM6SF1-201ENST00000258909 TRAV26-1A0A087WT03 109 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 A0A0J9YY99 117 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 NDUFB4O95168 129 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 NHLH2Q02577 135 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 CLINT1Q14677 625 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 ATP6V1FQ16864 119 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 THAP6Q8TBB0 222 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
TM6SF1-201ENST00000258909 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 ZNF253O75346 499 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 RLN2P04090 185 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 HOXA5P20719 270 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 ASAH1Q13510 395 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 EXOC3-AS1Q8N2X6 119 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 LINC00612Q8N6U2 182 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 CHAC2Q8WUX2 184 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 ODF3Q96PU9 254 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 NPCDR1Q9BY65 106 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 TMEM14CQ9P0S9 112 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 TIMM9Q9Y5J7 89 aa13.25□□□□□ -0.29
TM6SF1-201ENST00000258909 HIST1H1EP10412 219 aaKnown RBP13.24□□□□□ -0.29
TM6SF1-201ENST00000258909 TNP2Q05952 138 aa13.24□□□□□ -0.29
TM6SF1-201ENST00000258909 SSX7Q7RTT5 188 aa13.24□□□□□ -0.29
TM6SF1-201ENST00000258909 GNPNAT1Q96EK6 184 aaPredicted RBP13.24□□□□□ -0.29
TM6SF1-201ENST00000258909 ABCA13Q86UQ4 5058 aa13.24□□□□□ -0.29
TM6SF1-201ENST00000258909 LRRC37A5PQ49AS3 106 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 Q6ZTI0 123 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 PYGO2Q9BRQ0 406 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 SLC25A2Q9BXI2 301 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 OR5AC2Q9NZP5 309 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 MPDU1O75352 247 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 M6PRP20645 277 aa13.23□□□□□ -0.29
TM6SF1-201ENST00000258909 CD300CQ08708 224 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms