RNA–Protein interactions for RNA: ENST00000258418.9

CAB39-201, Transcript of calcium binding protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAB39, Length 3,826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-201ENST00000258418 TRAV30A0A087WSZ9 112 aa11.67□□□□□ -0.54
CAB39-201ENST00000258418 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
CAB39-201ENST00000258418 OR10J3Q5JRS4 329 aa11.67□□□□□ -0.54
CAB39-201ENST00000258418 NEU4Q8WWR8 484 aaPredicted RBP11.67□□□□□ -0.54
CAB39-201ENST00000258418 NCOR1P1Q9H4R4 102 aa11.67□□□□□ -0.54
CAB39-201ENST00000258418 LY96Q9Y6Y9 160 aa11.67□□□□□ -0.54
CAB39-201ENST00000258418 HIST1H1AQ02539 215 aaPredicted RBP11.66□□□□□ -0.54
CAB39-201ENST00000258418 COA6Q5JTJ3 125 aaKnown RBP11.66□□□□□ -0.54
CAB39-201ENST00000258418 TNFRSF14Q92956 283 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 COL25A1Q9BXS0 654 aaPredicted RBP11.66□□□□□ -0.54
CAB39-201ENST00000258418 C7orf71A4D174 169 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 SLC25A34Q6PIV7 304 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 ZC2HC1AQ96GY0 325 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 ACANP16112 2415 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 FAM71F2Q6NXP2 309 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 CLEC2AQ6UVW9 174 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 Q71RC1 249 aaPredicted RBP11.66□□□□□ -0.54
CAB39-201ENST00000258418 FER1L6-AS1Q8NA97 138 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 C7orf69Q9H7B7 122 aa11.66□□□□□ -0.54
CAB39-201ENST00000258418 DLEU1O43261 78 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 PVRIGQ6DKI7 326 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 LINC00311Q8N616 119 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 ZNF462Q96JM2 2506 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 PRTN3P24158 256 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 TP53TG3Q9ULZ0 132 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 JMJD1CQ15652 2540 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 ATP6V0E1O15342 81 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 FCN3O75636 299 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 TOMM40O96008 361 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 ATP5G2Q06055 141 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 C3orf36Q3SXR2 165 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 STPG4Q8N801 248 aa11.65□□□□□ -0.54
CAB39-201ENST00000258418 SMIM27A0A1W2PRY6 76 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 BMI1P35226 326 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 NBL1P41271 181 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 Q0VG73 95 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 KAAG1Q9UBP8 84 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
CAB39-201ENST00000258418 SHANK2-AS3Q9BTD1 123 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 IGLV2-8P01709 118 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 IFI27P40305 119 aaPredicted RBP11.64□□□□□ -0.55
CAB39-201ENST00000258418 CACNG7P62955 275 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 ZNF491Q8N8L2 437 aa11.64□□□□□ -0.55
CAB39-201ENST00000258418 TRBV19A0A075B6N1 114 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 SH2D1AO60880 128 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 TMEM249Q2WGJ8 235 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 Q5PR19 223 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 MSRB2Q9Y3D2 182 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 PSG9Q00887 426 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 MPV17L2Q567V2 206 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 LRBAP50851 2863 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 TRAV9-2A0A087WT02 112 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 A0A087X0K7 114 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 K7EIM0 57 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 VGLL1Q99990 258 aa11.63□□□□□ -0.55
CAB39-201ENST00000258418 ADORA2A-AS1P86434 159 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 FAM74A4Q5TZK3 123 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 THAP8Q8NA92 274 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 IGF2BP2-AS1Q96M15 143 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 DEFB1P60022 68 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 PSG3Q16557 428 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 GDF5OSQ5U4N7 250 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 GTSF1Q8WW33 167 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 TEX22C9J3V5 150 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 CCL19Q99731 98 aa11.62□□□□□ -0.55
CAB39-201ENST00000258418 SMIM17P0DL12 118 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 ZFP36P26651 326 aaKnown RBP11.61□□□□□ -0.55
CAB39-201ENST00000258418 SAPCD1Q5SSQ6 148 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 ZNF562Q6V9R5 426 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 ORMDL3Q8N138 153 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 EEF1AKMT3Q96AZ1 226 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 FN1P02751 2386 aaKnown RBP11.61□□□□□ -0.55
CAB39-201ENST00000258418 GP9P14770 177 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 TMEM160Q9NX00 188 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 IGLL1P15814 213 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 SP5Q6BEB4 398 aaPredicted RBP11.61□□□□□ -0.55
CAB39-201ENST00000258418 NRGNQ92686 78 aa11.61□□□□□ -0.55
CAB39-201ENST00000258418 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 GCSHP23434 173 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 DYNAPQ8N1N2 210 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 ZFP30Q9Y2G7 519 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 TNRC6BQ9UPQ9 1833 aaKnown RBP11.6□□□□□ -0.55
CAB39-201ENST00000258418 H3BUX3 64 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 H3BVH4 76 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 ZNF414Q96IQ9 312 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 MAP1LC3AQ9H492 121 aa11.6□□□□□ -0.55
CAB39-201ENST00000258418 I3L2K1 104 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 IGLC2P0DOY2 106 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 IGLC3P0DOY3 106 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 TSPOP30536 169 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 LDLRAD2Q5SZI1 272 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 PHLDA3Q9Y5J5 127 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 FABP5P3A8MUU1 101 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 SYS1-DBNDD2H3BUS1 97 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 C11orf44Q8N8P7 122 aa11.59□□□□□ -0.55
CAB39-201ENST00000258418 MSRB1Q9NZV6 116 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms