RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 PAX8Q06710 450 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 UFC1Q9Y3C8 167 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 TMEM8BA6NDV4 472 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 M0QZ24 198 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 CTSGP08311 255 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
RFX1-201ENST00000254325 LOC102724200A0A096LPH7 203 aaPredicted RBP12.31□□□□□ -0.44
RFX1-201ENST00000254325 TGFAP01135 160 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 CKS2P33552 79 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 PMCHL1Q16048 86 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 LCN12Q6JVE5 192 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 TRBV7-1A0A0A6YYK4 115 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 NDUFS8O00217 210 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 KHDC1LQ5JSQ8 128 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 WFDC3Q8IUB2 231 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 GFRA4Q9GZZ7 299 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 WI2-2373I1.2A0A1W2PRP0 233 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 SH2D1AO60880 128 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 ARMS2P0C7Q2 107 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
RFX1-201ENST00000254325 PAX2Q02962 417 aa12.31□□□□□ -0.44
RFX1-201ENST00000254325 FBLL1A6NHQ2 334 aaKnown RBP12.3□□□□□ -0.44
RFX1-201ENST00000254325 OR5AL1P0C617 328 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 FER1L6-AS1Q8NA97 138 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 HSPB8Q9UJY1 196 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 MSMBP08118 114 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 MYCNOSP40205 109 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 C14orf144Q96I85 54 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 POLR3KQ9Y2Y1 108 aaPredicted RBP12.3□□□□□ -0.44
RFX1-201ENST00000254325 B4DSR2 109 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 AP5S1Q9NUS5 200 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 FABP5P3A8MUU1 101 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 C1orf194Q5T5A4 169 aa12.3□□□□□ -0.44
RFX1-201ENST00000254325 C3orf79P0CE67 100 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 LYZL1Q6UWQ5 148 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 LINC00322Q6ZN03 302 aaPredicted RBP12.29□□□□□ -0.44
RFX1-201ENST00000254325 ALKBH7Q9BT30 221 aaPredicted RBP12.29□□□□□ -0.44
RFX1-201ENST00000254325 PKD1L2Q7Z442 2459 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 A0A1B0GW15 77 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 APOHP02749 345 aaPredicted RBP12.29□□□□□ -0.44
RFX1-201ENST00000254325 IGLC2P0DOY2 106 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 HLA-DMBP28068 263 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 RNF182Q8N6D2 247 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 TMEM70Q9BUB7 260 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 A8MWP6 167 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 LINC00614P0C842 121 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 BCL6BQ8N143 479 aaPredicted RBP12.29□□□□□ -0.44
RFX1-201ENST00000254325 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 OR8A1Q8NGG7 326 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 OR10J6PQ8NGY7 276 aa12.29□□□□□ -0.44
RFX1-201ENST00000254325 WIPF2Q8TF74 440 aaPredicted RBP12.29□□□□□ -0.44
RFX1-201ENST00000254325 FAM231BA6NCW3 169 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 M0QZK8 103 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 RPLP1P05386 114 aaKnown RBP12.28□□□□□ -0.44
RFX1-201ENST00000254325 ERCC8Q13216 396 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 IGHV4-30-2A0A087WSY4 118 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
RFX1-201ENST00000254325 ZNF138P52744 262 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 SPANXN1Q5VSR9 72 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 ZNF502Q8TBZ5 544 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 PRELID3AQ96N28 172 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 SELENOKQ9Y6D0 94 aa12.28□□□□□ -0.44
RFX1-201ENST00000254325 EBI3Q14213 229 aa12.27□□□□□ -0.44
RFX1-201ENST00000254325 GTSF1Q8WW33 167 aa12.27□□□□□ -0.44
RFX1-201ENST00000254325 A0A0G2JLM5 398 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 LINC01548A6NM66 108 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 IGHV4-38-2P0DP08 117 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 TFPI2P48307 235 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 C10orf105Q8TEF2 133 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 MLST8Q9BVC4 326 aa12.27□□□□□ -0.45
RFX1-201ENST00000254325 MBD6Q96DN6 1003 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 VGLL1Q99990 258 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 MYO18BQ8IUG5 2567 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 Q8N6K4 173 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 NRGNQ92686 78 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 PRR25Q96S07 402 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 FAM181BA6NEQ2 426 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 FAM106AQ4KMX7 169 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 MAPK1IP1LQ8NDC0 245 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 CFAP47Q6ZTR5 3102 aa12.26□□□□□ -0.45
RFX1-201ENST00000254325 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 HIST1H1AQ02539 215 aaPredicted RBP12.25□□□□□ -0.45
RFX1-201ENST00000254325 FBLN7Q53RD9 439 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 ZNF48Q96MX3 618 aaPredicted RBP12.25□□□□□ -0.45
RFX1-201ENST00000254325 ADGRG4Q8IZF6 3080 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 PRB1P04280 392 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 C5orf56Q8N8D9 126 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 DSCR9P59020 149 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 TM4SF20Q53R12 229 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 ORMDL3Q8N138 153 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
RFX1-201ENST00000254325 DOPEY2Q9Y3R5 2298 aa12.24□□□□□ -0.45
RFX1-201ENST00000254325 CHCHD1Q96BP2 118 aaKnown RBP12.24□□□□□ -0.45
RFX1-201ENST00000254325 TP53TG3Q9ULZ0 132 aa12.24□□□□□ -0.45
RFX1-201ENST00000254325 LBHQ53QV2 105 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms