RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 KAAG1Q9UBP8 84 aa15.43■□□□□ 0.06
PPFIA1-201ENST00000253925 TRAV8-4A0A0B4J246 113 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 CIRBPQ14011 172 aaKnown RBP15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 GLMPQ8WWB7 406 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 LY6HO94772 140 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 TPSG1Q9NRR2 321 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 TMEM14CQ9P0S9 112 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 TRBV7-1A0A0A6YYK4 115 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 LAGE3Q14657 143 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 TEX43Q6ZNM6 134 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 PIP4P1Q86T03 277 aa15.42■□□□□ 0.06
PPFIA1-201ENST00000253925 K7EP13 123 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 CD7P09564 240 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 LINC00527Q9UJ94 153 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 CACNA1BQ00975 2339 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 GOLGB1Q14789 3259 aaKnown RBP15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 TNFRSF18Q9Y5U5 241 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 TRAV40A0A0B4J280 105 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 C19orf54Q5BKX5 351 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 C8orf31Q8N9H6 132 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 MED13Q9UHV7 2174 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 ZGRF1Q86YA3 2104 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 IGHV3OR16-12A0A075B7B8 117 aa15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 TSSC4Q9Y5U2 329 aaPredicted RBP15.41■□□□□ 0.06
PPFIA1-201ENST00000253925 LINC01549A6NIU2 74 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 CCL25O15444 150 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 DIAPH2-AS1Q14236 149 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 PLCE1Q9P212 2302 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 RNASE1P07998 156 aaKnown RBP15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 ZNF815PA8K554 130 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 IGLL1P15814 213 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 IFI27P40305 119 aaPredicted RBP15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 Q6ZPA2 131 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 JMJD8Q96S16 334 aa15.4■□□□□ 0.06
PPFIA1-201ENST00000253925 NPFFO15130 113 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 CHTOPQ9Y3Y2 248 aaKnown RBP15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 KIR2DL5BA0A0G2JN68 375 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 KIR2DL5BA0A0G2JPC4 375 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 MEIG1Q5JSS6 88 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 KIR2DL5AQ8N109 375 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 DNAL4O96015 105 aa15.39■□□□□ 0.05
PPFIA1-201ENST00000253925 IGLC1P0CG04 106 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 IGFL4Q6B9Z1 124 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 RNASE8Q8TDE3 154 aaKnown RBP15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 COPS9Q8WXC6 57 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 TMEM219Q86XT9 240 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 DKK4Q9UBT3 224 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 NDUFB8O95169 186 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 C10orf142B7Z368 130 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 UBE2L6O14933 153 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 RRN3P1Q2M238 152 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 LINC00477Q96M19 166 aa15.38■□□□□ 0.05
PPFIA1-201ENST00000253925 HAX1O00165 279 aa15.37■□□□□ 0.05
PPFIA1-201ENST00000253925 MRAP2Q96G30 205 aa15.37■□□□□ 0.05
PPFIA1-201ENST00000253925 PRR30Q53SZ7 412 aaPredicted RBP15.37■□□□□ 0.05
PPFIA1-201ENST00000253925 SMAD7O15105 426 aaKnown RBP15.37■□□□□ 0.05
PPFIA1-201ENST00000253925 DUSP14O95147 198 aaKnown RBP15.37■□□□□ 0.05
PPFIA1-201ENST00000253925 C9orf118A6NHY6 69 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 H3BRM9 83 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 WT1P19544 449 aaPredicted RBP15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 FAM104BQ5XKR9 115 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 H3BRN7 92 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 TMEM238C9JI98 176 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 PRSS46E5RG02 174 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 SPRNQ5BIV9 151 aa15.36■□□□□ 0.05
PPFIA1-201ENST00000253925 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.36■□□□□ 0.057e-7■■■■□ 21.5
PPFIA1-201ENST00000253925 SMKR1H3BMG3 65 aa15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 K7ENP7 123 aa15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 WIPF2Q8TF74 440 aaPredicted RBP15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 RCHY1Q96PM5 261 aa15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 IGLC7A0M8Q6 106 aa15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 DLX4Q92988 240 aaPredicted RBP15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 DUX3Q96PT4 197 aa15.35■□□□□ 0.05
PPFIA1-201ENST00000253925 TMEM213A2RRL7 107 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 FAM110DQ8TAY7 271 aaPredicted RBP15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 A0A1W2PNU3 283 aaPredicted RBP15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 SAA4P35542 130 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 LY6DQ14210 128 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 TMEM158Q8WZ71 300 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 CHAC1Q9BUX1 264 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 SSBP2P81877 361 aaPredicted RBP15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 NDPQ00604 133 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 DPH3P1Q9H4G8 78 aa15.34■□□□□ 0.05
PPFIA1-201ENST00000253925 K7EP34 96 aa15.33■□□□□ 0.05
PPFIA1-201ENST00000253925 ODF3L1Q8IXM7 274 aa15.33■□□□□ 0.05
PPFIA1-201ENST00000253925 TRAV12-3A0A0B4J271 114 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 AZU1P20160 251 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 PRSS22Q9GZN4 317 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 TRAV2A0A0B4J234 112 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 IGHV1-24A0A0C4DH33 117 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 FAM223BA6NKX1 122 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 P0C879 139 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 FAM223AQ8IWN6 122 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 USMG5Q96IX5 58 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 CTSZQ9UBR2 303 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 ADAMTS9Q9P2N4 1935 aa15.33■□□□□ 0.04
PPFIA1-201ENST00000253925 C8orf49Q96NF6 230 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 K7EM74 188 aa15.32■□□□□ 0.04
PPFIA1-201ENST00000253925 LTAP01374 205 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms