RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
MBD4-201ENST00000249910 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
MBD4-201ENST00000249910 IGLV2-11P01706 119 aa11.46□□□□□ -0.57
MBD4-201ENST00000249910 CLEC19AQ6UXS0 136 aa11.46□□□□□ -0.57
MBD4-201ENST00000249910 FAM110DQ8TAY7 271 aaPredicted RBP11.46□□□□□ -0.57
MBD4-201ENST00000249910 CST9LQ9H4G1 147 aa11.46□□□□□ -0.57
MBD4-201ENST00000249910 GNB4Q9HAV0 340 aa11.46□□□□□ -0.57
MBD4-201ENST00000249910 IGHV3-66A0A0C4DH42 116 aa11.46□□□□□ -0.58
MBD4-201ENST00000249910 LTAP01374 205 aa11.46□□□□□ -0.58
MBD4-201ENST00000249910 RPS20P60866 119 aaKnown RBP11.46□□□□□ -0.58
MBD4-201ENST00000249910 F2Z2F3 143 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 ODF1Q14990 250 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 NUP35Q8NFH5 326 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 SONP18583 2426 aaKnown RBP11.45□□□□□ -0.58
MBD4-201ENST00000249910 HIGD1CA8MV81 97 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 H3BUX3 64 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 KRTAP10-9P60411 292 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 Q6ZS46 218 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 ZNF502Q8TBZ5 544 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 TMEM18Q96B42 140 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 FMC1Q96HJ9 113 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 SMPXQ9UHP9 88 aa11.45□□□□□ -0.58
MBD4-201ENST00000249910 IGHV3-49A0A0A0MS15 119 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 SCGB1D1O95968 90 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 BLCAPP62952 87 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TCF24Q7RTU0 167 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 MBD6Q96DN6 1003 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TP53TG3Q9ULZ0 132 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TENM4Q6N022 2769 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TRAV9-1A0A075B6T8 112 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TRBV9A0A0B4J1U6 114 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 SLAQ13239 276 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 TOMM20LQ6UXN7 152 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 MOB4Q9Y3A3 225 aa11.44□□□□□ -0.58
MBD4-201ENST00000249910 K7ERU9 68 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 ZNF207O43670 478 aaKnown RBP11.43□□□□□ -0.58
MBD4-201ENST00000249910 TMEM136Q6ZRR5 245 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 FAM231DQ6ZW35 169 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 Q86TA4 180 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 ZNF738Q8NE65 137 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 NAGKQ9UJ70 344 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 MYO9AB2RTY4 2548 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 ZNF785A8K8V0 405 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 CD33P20138 364 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 CAMPP49913 170 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
MBD4-201ENST00000249910 COX6B1P14854 86 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 CRISP2P16562 243 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 VN1R17PQ8TDU5 208 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 SSBP4Q9BWG4 385 aaPredicted RBP11.42□□□□□ -0.58
MBD4-201ENST00000249910 RABAC1Q9UI14 185 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 SMAD5-AS1Q9Y6J3 95 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 IZUMO1RA6ND01 250 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 B4DSR2 109 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 P01737 135 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 GDF5OSQ5U4N7 250 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 LCNL1Q6ZST4 164 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 STPG4Q8N801 248 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 TSKUQ8WUA8 353 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 GRAMD2BQ96HH9 432 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 MEGF9Q9H1U4 602 aa11.42□□□□□ -0.58
MBD4-201ENST00000249910 TRAV41A0A0B4J266 112 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 APOHP02749 345 aaPredicted RBP11.41□□□□□ -0.58
MBD4-201ENST00000249910 LINC00310P59036 64 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 GTSF1Q8WW33 167 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 A0A1B0GV72 72 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 ZNF705FA8MVS1 300 aaPredicted RBP11.41□□□□□ -0.58
MBD4-201ENST00000249910 DIRC3C9JPN6 131 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 DAZAP1Q96EP5 407 aaKnown RBP11.41□□□□□ -0.58
MBD4-201ENST00000249910 ZC2HC1AQ96GY0 325 aa11.41□□□□□ -0.58
MBD4-201ENST00000249910 C19orf71A6NCJ1 209 aa11.4□□□□□ -0.58
MBD4-201ENST00000249910 BMPR1BO00238 502 aa11.4□□□□□ -0.58
MBD4-201ENST00000249910 SERF1AO75920 110 aa11.4□□□□□ -0.58
MBD4-201ENST00000249910 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
MBD4-201ENST00000249910 ZNF331Q9NQX6 463 aaPredicted RBP11.4□□□□□ -0.58
MBD4-201ENST00000249910 IGKV2-40A0A087WW87 121 aaPredicted RBP11.4□□□□□ -0.59
MBD4-201ENST00000249910 IGKV2D-40P01614 121 aaPredicted RBP11.4□□□□□ -0.59
MBD4-201ENST00000249910 RPL7P18124 248 aaKnown RBP11.4□□□□□ -0.59
MBD4-201ENST00000249910 ZNF479Q96JC4 524 aa11.4□□□□□ -0.59
MBD4-201ENST00000249910 RPP21Q9H633 154 aaKnown RBP11.4□□□□□ -0.59
MBD4-201ENST00000249910 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.59
MBD4-201ENST00000249910 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.59
MBD4-201ENST00000249910 PSG8Q9UQ74 426 aa11.4□□□□□ -0.59
MBD4-201ENST00000249910 HELZ2Q9BYK8 2649 aaKnown RBP11.39□□□□□ -0.59
MBD4-201ENST00000249910 PRRC2AP48634 2157 aaKnown RBP11.39□□□□□ -0.59
MBD4-201ENST00000249910 TRBV12-3P01733 135 aa11.39□□□□□ -0.59
MBD4-201ENST00000249910 PSG3Q16557 428 aa11.39□□□□□ -0.59
MBD4-201ENST00000249910 BAGE3Q86Y29 109 aa11.39□□□□□ -0.59
MBD4-201ENST00000249910 PGLYRP4Q96LB8 373 aa11.39□□□□□ -0.59
MBD4-201ENST00000249910 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
MBD4-201ENST00000249910 CLPSL1A2RUU4 121 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 TGFAP01135 160 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 TRGV3P03979 118 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 SRIP30626 198 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 RIPPLY3P57055 190 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 KLK15Q9H2R5 256 aa11.38□□□□□ -0.59
MBD4-201ENST00000249910 BUB3O43684 328 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms