RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 THYN1Q9P016 225 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 SERTM2A0A1B0GWG4 89 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 TRGV9Q99603 122 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 CHRDL1Q9BU40 450 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 ZNF586Q9NXT0 402 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 V9GYV3 84 aa6.74□□□□□ -1.33
VPS4B-201ENST00000238497 VWFP04275 2813 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 I3L2K1 104 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 M0QZ24 198 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 SERF1AO75920 110 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 OR11H6Q8NGC7 330 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 NEU1Q99519 415 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 ANK2Q01484 3957 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 LY6LH3BQJ8 138 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 NDUFA7O95182 113 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 AMTP48728 403 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 ZNF562Q6V9R5 426 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 C8orf31Q8N9H6 132 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 STXBP6Q8NFX7 210 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 Q8TAT8 98 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 CFHR4Q92496 578 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 IGKV2-40A0A087WW87 121 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-201ENST00000238497 FNDC10F2Z333 226 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 TGOLN2O43493 480 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 IGKV2D-40P01614 121 aaPredicted RBP6.73□□□□□ -1.33
VPS4B-201ENST00000238497 MAS1LP35410 378 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 AAMDCQ9H7C9 122 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 CLEC5AQ9NY25 188 aa6.73□□□□□ -1.33
VPS4B-201ENST00000238497 TBL2Q9Y4P3 447 aaKnown RBP6.73□□□□□ -1.33
VPS4B-201ENST00000238497 CRYGBP07316 175 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 PF4V1P10720 104 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 RELQ04864 619 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-201ENST00000238497 TMEM95Q3KNT9 176 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 ACTL10Q5JWF8 245 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
VPS4B-201ENST00000238497 TOMM20LQ6UXN7 152 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 ATOH7Q8N100 152 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 KLHDC1Q8N7A1 406 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 THAP8Q8NA92 274 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 A0A1W2PRX2 142 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 HLA-DRB1P01911 266 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 TCRAP04437 139 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 BLCAPP62952 87 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 BATFQ16520 125 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 LINC00322Q6ZN03 302 aaPredicted RBP6.72□□□□□ -1.33
VPS4B-201ENST00000238497 ZNF491Q8N8L2 437 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 C5orf17Q8NAS9 161 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 VN1R17PQ8TDU5 208 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 FANCD2OSQ96PS1 177 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 MEGF9Q9H1U4 602 aa6.72□□□□□ -1.33
VPS4B-201ENST00000238497 IGHV7-81A0A0B4J1V7 117 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 PSMB11A5LHX3 300 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 APCSP02743 223 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 HIST1H1EP10412 219 aaKnown RBP6.71□□□□□ -1.33
VPS4B-201ENST00000238497 PPIFP30405 207 aaKnown RBP6.71□□□□□ -1.33
VPS4B-201ENST00000238497 CSN1S1P47710 185 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 GPR82Q96P67 336 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 PRSS22Q9GZN4 317 aa6.71□□□□□ -1.33
VPS4B-201ENST00000238497 A0A1B0GV90 55 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 C9JCJ5 164 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 CHEK1O14757 476 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 PROK1P58294 105 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 PMCHL1Q16048 86 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 MINOS1Q5TGZ0 78 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 WFDC3Q8IUB2 231 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 RNF182Q8N6D2 247 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 MINOS1-NBL1R4GNA1 71 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 IGLV2-8P01709 118 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 TRGV3P03979 118 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 CT45A10P0DMU9 189 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 ZNF138P52744 262 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 DEFA6Q01524 100 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 Q8N9W7 124 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 NUP35Q8NFH5 326 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 ATG101Q9BSB4 218 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 PAM16Q9Y3D7 125 aa6.71□□□□□ -1.34
VPS4B-201ENST00000238497 ODF3BA8MYP8 253 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 K7EQM0 130 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 C11orf52Q96A22 123 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 PYGO2Q9BRQ0 406 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 NPIPB5A8MRT5 1133 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 TSTD3H0UI37 97 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 GCGP01275 180 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 CRYGCP07315 174 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 TCTAP57738 103 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 TPPP2P59282 170 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 KRTAP10-3P60369 221 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 GBGT1Q8N5D6 347 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 AJUBAQ96IF1 538 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 C8orf49Q96NF6 230 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 OSTCQ9NRP0 149 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 ARL2-SNX15V9GYD0 113 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 HSBP1O75506 76 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 ORM1P02763 201 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 GP9P14770 177 aa6.7□□□□□ -1.34
VPS4B-201ENST00000238497 TFPI2P48307 235 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms