RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 CSN1S1P47710 185 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 Q86TA4 180 aa11.57□□□□□ -0.56
HDHD3-201ENST00000238379 FN1P02751 2386 aaKnown RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 TGIF2-C20orf24A0A0A6YYL0 155 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 SERTM2A0A1B0GWG4 89 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 A8MWP6 167 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 CXCL1P09341 107 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 ERVFC1-1P60608 527 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 PSG3Q16557 428 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 OSTCQ9NRP0 149 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 SETD2Q9BYW2 2564 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 ZNF705FA8MVS1 300 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 NDUFA7O95182 113 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 RAB5AP20339 215 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 SYNJ2BPP57105 145 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 FLI1Q01543 452 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 KLF5Q13887 457 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 WFDC12Q8WWY7 111 aa11.56□□□□□ -0.56
HDHD3-201ENST00000238379 RNASE7Q9H1E1 156 aaKnown RBP11.56□□□□□ -0.56
HDHD3-201ENST00000238379 CUBNO60494 3623 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 PRNTQ86SH4 94 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 C1QL4Q86Z23 238 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 TMEM183AQ8IXX5 376 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 V9GYV3 84 aa11.55□□□□□ -0.56
HDHD3-201ENST00000238379 TRBV24-1A0A075B6N3 115 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 IGKV2-40A0A087WW87 121 aaPredicted RBP11.54□□□□□ -0.56
HDHD3-201ENST00000238379 IGKV2D-40P01614 121 aaPredicted RBP11.54□□□□□ -0.56
HDHD3-201ENST00000238379 KHDC1LQ5JSQ8 128 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 IMMP2LQ96T52 175 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 PYGO2Q9BRQ0 406 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 ZFP30Q9Y2G7 519 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 BAHCC1Q9P281 2608 aa11.54□□□□□ -0.56
HDHD3-201ENST00000238379 SETXQ7Z333 2677 aaKnown RBP11.53□□□□□ -0.56
HDHD3-201ENST00000238379 LINC01619G3V211 115 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 SOCS3O14543 225 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 FOLR2P14207 255 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 S100PP25815 95 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 IBA57Q5T440 356 aaKnown RBP11.53□□□□□ -0.56
HDHD3-201ENST00000238379 FAM231DQ6ZW35 169 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 OR11H1Q8NG94 326 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 MRPL53Q96EL3 112 aaKnown RBP11.53□□□□□ -0.56
HDHD3-201ENST00000238379 PRAC2D3DTV9 90 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 CRLF1O75462 422 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 CD28P10747 220 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 SLURP1P55000 103 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 FOXL1Q12952 345 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 OR1N2Q8NGR9 330 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 C16orf92Q96LL3 132 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 NRN1Q9NPD7 142 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 CLEC5AQ9NY25 188 aa11.53□□□□□ -0.56
HDHD3-201ENST00000238379 TCF21O43680 179 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 BMI1P35226 326 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 FAM3BP58499 235 aaPredicted RBP11.52□□□□□ -0.57
HDHD3-201ENST00000238379 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
HDHD3-201ENST00000238379 PRR27Q6MZM9 219 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 LINC00322Q6ZN03 302 aaPredicted RBP11.52□□□□□ -0.57
HDHD3-201ENST00000238379 TCF24Q7RTU0 167 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 C11orf44Q8N8P7 122 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 FAM210BQ96KR6 192 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 VGLL1Q99990 258 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 IL36BQ9NZH7 164 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 SELENOKQ9Y6D0 94 aa11.52□□□□□ -0.57
HDHD3-201ENST00000238379 FBLL1A6NHQ2 334 aaKnown RBP11.51□□□□□ -0.57
HDHD3-201ENST00000238379 C2orf70A6NJV1 201 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 CBLN1P23435 193 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 KCNIP4Q6PIL6 250 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 DPF1Q92782 380 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 ASCL2Q99929 193 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 A0A1W2PPQ1 181 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 RBAKDNA6NC62 111 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 C19orf71A6NCJ1 209 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 HAX1O00165 279 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 PROK1P58294 105 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 C20orf173Q96LM9 149 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 MLXQ9UH92 298 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 RNF114Q9Y508 228 aa11.51□□□□□ -0.57
HDHD3-201ENST00000238379 ADAMTSL5Q6ZMM2 481 aa11.5□□□□□ -0.57
HDHD3-201ENST00000238379 ZC2HC1AQ96GY0 325 aa11.5□□□□□ -0.57
HDHD3-201ENST00000238379 CITED2Q99967 270 aaPredicted RBP11.5□□□□□ -0.57
HDHD3-201ENST00000238379 F8P00451 2351 aa11.5□□□□□ -0.57
HDHD3-201ENST00000238379 IGKV3-7A0A075B6H7 116 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 SRSF2Q01130 221 aaKnown RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 COX8CQ7Z4L0 72 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 PRR25Q96S07 402 aa11.49□□□□□ -0.57
HDHD3-201ENST00000238379 TSSC4Q9Y5U2 329 aaPredicted RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 GATCO43716 136 aaKnown RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 RPS10P46783 165 aaKnown RBP11.49□□□□□ -0.57
HDHD3-201ENST00000238379 ERCC8Q13216 396 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms