RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 NUP35Q8NFH5 326 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 DAZAP1Q96EP5 407 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 ZC2HC1AQ96GY0 325 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 PRDM13Q9H4Q3 707 aa13.24□□□□□ -0.29
RABGGTA-201ENST00000216840 TEX15Q9BXT5 2789 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 SNURFLB1AK76 121 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 CHEK1O14757 476 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 MRPL54Q6P161 138 aaKnown RBP13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 UNQ9165/PRO28630Q6UXU0 137 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 GBGT1Q8N5D6 347 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 NEU1Q99519 415 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 NAT8BQ9UHF3 227 aa13.23□□□□□ -0.29
RABGGTA-201ENST00000216840 IGKV2-40A0A087WW87 121 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 IGKV2D-40P01614 121 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 COX19Q49B96 90 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 TMEM136Q6ZRR5 245 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 C12orf57Q99622 126 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 HOXA3O43365 443 aaPredicted RBP13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 PSMB8P28062 276 aa13.22□□□□□ -0.29
RABGGTA-201ENST00000216840 HIGD1CA8MV81 97 aa13.21□□□□□ -0.29
RABGGTA-201ENST00000216840 ZNF705FA8MVS1 300 aaPredicted RBP13.21□□□□□ -0.29
RABGGTA-201ENST00000216840 A8MWL6 223 aa13.21□□□□□ -0.29
RABGGTA-201ENST00000216840 C16orf54Q6UWD8 224 aa13.21□□□□□ -0.29
RABGGTA-201ENST00000216840 ITPR3Q14573 2671 aa13.21□□□□□ -0.29
RABGGTA-201ENST00000216840 MT-ND6P03923 174 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 C8orf49Q96NF6 230 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 SLC50A1Q9BRV3 221 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 C10orf99Q6UWK7 81 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 TCF24Q7RTU0 167 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 OR4B1Q8NGF8 309 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 WIPF2Q8TF74 440 aaPredicted RBP13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 GTSF1Q8WW33 167 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 GLMPQ8WWB7 406 aa13.2□□□□□ -0.3
RABGGTA-201ENST00000216840 TMEM89A2RUT3 159 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 SMIM6P0DI80 62 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 S100A2P29034 98 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 CRIP1P50238 77 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 FAM209BQ5JX69 171 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 RNF182Q8N6D2 247 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 VGLL1Q99990 258 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 FBLL1A6NHQ2 334 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 SMAD7O15105 426 aaKnown RBP13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 RAB4BP61018 213 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 RASL11AQ6T310 242 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
RABGGTA-201ENST00000216840 MXRA5Q9NR99 2828 aa13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 HLA-DQA1P01909 254 aa13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 OR2D3Q8NGH3 330 aa13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 HIST1H2BLQ99880 126 aa13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 NPFFR1Q9GZQ6 430 aa13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 PEF1Q9UBV8 284 aaKnown RBP13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 ZNF469Q96JG9 3925 aaPredicted RBP13.18□□□□□ -0.3
RABGGTA-201ENST00000216840 PRAC2D3DTV9 90 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 FABP4P15090 132 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 C8orf86Q6ZUL3 223 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 PRR25Q96S07 402 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 FAM231BA6NCW3 169 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 SAPCD1Q5SSQ6 148 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 GDF5OSQ5U4N7 250 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 OR10D4PQ8NGN7 298 aa13.17□□□□□ -0.3
RABGGTA-201ENST00000216840 PDZD2O15018 2839 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 A0A1B0GUS0 222 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 GZMBP10144 247 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 IL17RELQ6ZVW7 336 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 Q8TAT8 98 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 CT45A10P0DMU9 189 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 RBPMS2Q6ZRY4 209 aaKnown RBP13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 PGLYRP4Q96LB8 373 aa13.16□□□□□ -0.3
RABGGTA-201ENST00000216840 RBAKDNA6NC62 111 aa13.15□□□□□ -0.3
RABGGTA-201ENST00000216840 AMBPP02760 352 aa13.15□□□□□ -0.3
RABGGTA-201ENST00000216840 CRISP2P16562 243 aa13.15□□□□□ -0.3
RABGGTA-201ENST00000216840 ERCC8Q13216 396 aa13.15□□□□□ -0.3
RABGGTA-201ENST00000216840 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 KIAA1644Q3SXP7 199 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 TMEM256Q8N2U0 113 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 MRPL53Q96EL3 112 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 TP53TG3Q9ULZ0 132 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 A0A1W2PS18 150 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 APCSP02743 223 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 FOXA3P55318 350 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 FOXE3Q13461 319 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 TM4SF20Q53R12 229 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 GPHB5Q86YW7 130 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 PACRGQ96M98 296 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 DUX5Q96PT3 197 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 CCDC168Q8NDH2 2452 aa13.14□□□□□ -0.31
RABGGTA-201ENST00000216840 IGHV7-4-1A0A0J9YVY3 117 aa13.13□□□□□ -0.31
RABGGTA-201ENST00000216840 SH2D1AO60880 128 aa13.13□□□□□ -0.31
RABGGTA-201ENST00000216840 CAMPP49913 170 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms