RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 BUB3O43684 328 aa20.17■□□□□ 0.82
RTN4R-201ENST00000043402 HLA-DMBP28068 263 aa20.17■□□□□ 0.82
RTN4R-201ENST00000043402 CSN1S1P47710 185 aa20.17■□□□□ 0.82
RTN4R-201ENST00000043402 APOHP02749 345 aaPredicted RBP20.16■□□□□ 0.82
RTN4R-201ENST00000043402 ZNF462Q96JM2 2506 aa20.16■□□□□ 0.82
RTN4R-201ENST00000043402 FOXA3P55318 350 aaPredicted RBP20.15■□□□□ 0.82
RTN4R-201ENST00000043402 SIGLECL1Q8N7X8 197 aa20.15■□□□□ 0.82
RTN4R-201ENST00000043402 TRBV7-1A0A0A6YYK4 115 aa20.15■□□□□ 0.82
RTN4R-201ENST00000043402 CHEK1O14757 476 aa20.15■□□□□ 0.82
RTN4R-201ENST00000043402 CRIP2P52943 208 aaPredicted RBP20.15■□□□□ 0.82
RTN4R-201ENST00000043402 LY6EQ16553 131 aa20.15■□□□□ 0.82
RTN4R-201ENST00000043402 SERTM2A0A1B0GWG4 89 aa20.14■□□□□ 0.81
RTN4R-201ENST00000043402 AVPP01185 164 aa20.14■□□□□ 0.81
RTN4R-201ENST00000043402 AMTP48728 403 aa20.14■□□□□ 0.81
RTN4R-201ENST00000043402 KLF5Q13887 457 aaPredicted RBP20.14■□□□□ 0.81
RTN4R-201ENST00000043402 IGHV3-66A0A0C4DH42 116 aa20.13■□□□□ 0.81
RTN4R-201ENST00000043402 FBN2P35556 2912 aa20.13■□□□□ 0.81
RTN4R-201ENST00000043402 H3BUX3 64 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 ZNF324O75467 553 aaPredicted RBP20.12■□□□□ 0.81
RTN4R-201ENST00000043402 PMCHP20382 165 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 ATP5G2Q06055 141 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 TEX43Q6ZNM6 134 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 ARL6IP6Q8N6S5 226 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 HIF1ANQ9NWT6 349 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 FAM19A2Q8N3H0 131 aa20.12■□□□□ 0.81
RTN4R-201ENST00000043402 IGHV3OR16-13A0A075B7E8 117 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 IGHV3-74A0A0B4J1X5 117 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 S100A7P31151 101 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 VGLL1Q99990 258 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 NRN1Q9NPD7 142 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 HAX1O00165 279 aa20.11■□□□□ 0.81
RTN4R-201ENST00000043402 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.1■□□□□ 0.81
RTN4R-201ENST00000043402 A6NDX4 124 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 A0A087X0K7 114 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 ZNF207O43670 478 aaKnown RBP20.1■□□□□ 0.81
RTN4R-201ENST00000043402 CT45A10P0DMU9 189 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 RAB9AP51151 201 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 RELQ04864 619 aaPredicted RBP20.1■□□□□ 0.81
RTN4R-201ENST00000043402 Q8TAT8 98 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 PRR25Q96S07 402 aa20.1■□□□□ 0.81
RTN4R-201ENST00000043402 FAM208BQ5VWN6 2430 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 B4DSR2 109 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 IGF1P05019 195 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 SSTP61278 116 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 LCN12Q6JVE5 192 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 COX8CQ7Z4L0 72 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 NIT1Q86X76 327 aa20.09■□□□□ 0.81
RTN4R-201ENST00000043402 IGHV3-49A0A0A0MS15 119 aa20.08■□□□□ 0.81
RTN4R-201ENST00000043402 EREGO14944 169 aa20.08■□□□□ 0.81
RTN4R-201ENST00000043402 TRGV3P03979 118 aa20.08■□□□□ 0.81
RTN4R-201ENST00000043402 ARMS2P0C7Q2 107 aa20.08■□□□□ 0.81
RTN4R-201ENST00000043402 SRSF1Q07955 248 aaKnown RBP eCLIP20.08■□□□□ 0.81
RTN4R-201ENST00000043402 TDRG1Q3Y452 100 aa20.08■□□□□ 0.81
RTN4R-201ENST00000043402 FAM223BA6NKX1 122 aa20.08■□□□□ 0.8
RTN4R-201ENST00000043402 FAM223AQ8IWN6 122 aa20.08■□□□□ 0.8
RTN4R-201ENST00000043402 CSPG4Q6UVK1 2322 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 Q6ZS46 218 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 A0A1B0GUT8 65 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 SH2D1AO60880 128 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 IGHG2P01859 326 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 PPIFP30405 207 aaKnown RBP20.07■□□□□ 0.8
RTN4R-201ENST00000043402 BLCAPP62952 87 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 C20orf144Q9BQM9 153 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 SNHG12Q9BXW3 62 aa20.07■□□□□ 0.8
RTN4R-201ENST00000043402 LRRK2Q5S007 2527 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 PRAC2D3DTV9 90 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 KRTDAPP60985 99 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 SAPCD1Q5SSQ6 148 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 RNF182Q8N6D2 247 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 Q8N976 141 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 URB1-AS1Q96HZ7 61 aa20.06■□□□□ 0.8
RTN4R-201ENST00000043402 NTF3P20783 257 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 DSCR9P59020 149 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 METTL26Q96S19 204 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 U3KQE9 123 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 UBR5O95071 2799 aaPredicted RBP20.05■□□□□ 0.8
RTN4R-201ENST00000043402 ZNF80P51504 273 aaPredicted RBP20.05■□□□□ 0.8
RTN4R-201ENST00000043402 ATP6V0BQ99437 205 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 VAMP8Q9BV40 100 aa20.05■□□□□ 0.8
RTN4R-201ENST00000043402 LOC102724200A0A096LPH7 203 aaPredicted RBP20.04■□□□□ 0.8
RTN4R-201ENST00000043402 M0R143 59 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 TRBV12-3P01733 135 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 FAM162BQ5T6X4 162 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 ZNF843Q8N446 348 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 TMSB15BA0A087X1C1 80 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 PAM16Q9Y3D7 125 aa20.04■□□□□ 0.8
RTN4R-201ENST00000043402 ANKRD17O75179 2603 aaKnown RBP20.04■□□□□ 0.8
RTN4R-201ENST00000043402 POLQO75417 2590 aa20.03■□□□□ 0.8
RTN4R-201ENST00000043402 FBLL1A6NHQ2 334 aaKnown RBP20.03■□□□□ 0.8
RTN4R-201ENST00000043402 USP9YO00507 2555 aaPredicted RBP20.03■□□□□ 0.8
RTN4R-201ENST00000043402 TPPP3Q9BW30 176 aa20.03■□□□□ 0.8
RTN4R-201ENST00000043402 CENPEQ02224 2701 aa20.03■□□□□ 0.8
RTN4R-201ENST00000043402 ERCC8Q13216 396 aa20.02■□□□□ 0.8
RTN4R-201ENST00000043402 RNASEKQ6P5S7 137 aaKnown RBP20.02■□□□□ 0.8
RTN4R-201ENST00000043402 ZNF705AQ6ZN79 300 aaPredicted RBP20.02■□□□□ 0.8
RTN4R-201ENST00000043402 A0A096LNT2 108 aa20.02■□□□□ 0.8
RTN4R-201ENST00000043402 TMEM189A5PLL7 270 aa20.02■□□□□ 0.8
RTN4R-201ENST00000043402 M0QZ24 198 aa20.02■□□□□ 0.8
RTN4R-201ENST00000043402 HSBP1O75506 76 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms