RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Tmem170aQ9D342 144 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 NgbQ9ER97 151 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nudt3Q9JI46 168 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pxmp4Q9JJW0 212 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Samt3A2ARK7 233 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nat8f7E0CYR6 227 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pate4Q09098 99 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem256Q5F285 113 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Npy6rQ61212 371 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Btf3Q64152 204 aaKnown RBP8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rab11fip5Q8R361 645 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Plppr2Q8VCY8 343 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1448Q8VFX1 314 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Znrf1Q91V17 227 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mpped1Q91ZG2 326 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nus1Q99LJ8 297 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Btf3l4Q9CQH7 158 aaKnown RBP8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pam16Q9CQV1 125 aa8.19□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Scgb1b10A0A087WPW0 93 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 E430018J23RikE9PZQ8 461 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist1h2bfP10853 126 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 CapgP24452 352 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Rab4aP56371 218 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 PilraQ2YFS3 302 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mbd6Q3TY92 1003 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1362Q5SZZ8 308 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tff3Q62395 81 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist1h2bbQ64475 126 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr963Q7TRA9 311 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Bricd5Q8BV89 174 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lrtm1Q8BXQ3 356 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist1h2bkQ8CGP1 126 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hist1h2bpQ8CGP2 126 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Klre1Q8CJC7 226 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Vmn1r179Q8R2B4 323 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1370Q8VFG4 316 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr355Q8VFP6 310 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr262Q8VFV8 312 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr346Q8VGJ7 309 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr577Q8VH11 312 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mrpl27Q99N92 148 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Atp6v1fQ9D1K2 119 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lmntd1Q9D4C1 413 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ccl28Q9JIL2 130 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nubp1Q9R060 320 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Myo15aQ9QZZ4 3511 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Chd8Q09XV5 2582 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Col4a4Q9QZR9 1682 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Trav6d-5A0A075B6B9 112 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P01796 113 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P01797 113 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 P01799 113 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fabp4P04117 132 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ifna6P07350 189 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Hspb7P35385 169 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm10447Q3UQ92 135 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Smim9Q3V0X1 137 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nhlh2Q64221 135 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cxxc4Q6NXI8 198 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Prss3Q792Z0 246 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Lax1Q8BHB3 407 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Fbxw26Q8BI58 466 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 BC049762Q8C601 163 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Mib2Q8R516 973 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cldn23Q9D7D7 296 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cyb5r3Q9DCN2 301 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Pard6aQ9Z101 346 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 SonQ9QX47 2444 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ncor2Q9WU42 2472 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Trav8n-2A0A075B633 112 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp980A2A9J5 645 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Arl16B1ATY8 173 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ptbp1P17225 527 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 G6pcP35576 357 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Cnn1Q08091 297 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp455Q7M6X9 461 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Harbi1Q8BR93 349 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr983Q8VG90 315 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nhp2Q9CRB2 153 aaKnown RBP8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tex36Q9D5N9 219 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Tmem225Q9D9S2 230 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr19Q9JHB2 309 aa8.18□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 MgaA2AWL7 3003 aaKnown RBP8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 A0A286YDM5 308 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm20422E9PUR3 255 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm19345G3UYD9 124 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm21719J3KMI9 230 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm21310J3QQ23 232 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 F2rl2O08675 369 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Oprk1P33534 380 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Prdx2Q61171 198 aaKnown RBP8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr1408Q8VG32 310 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr926Q9EQ98 308 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Trem3Q9JKE1 183 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Olfr251E9Q891 316 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Gm8677K9J7G9 307 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Nkx2-8O70584 235 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Ccl1P10146 92 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Zfp386Q1WWJ5 626 aa8.17□□□□□ -1.1
Pcdh1-201ENSMUST00000057185 Crybb1Q9WVJ5 250 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms