RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Cma2Q91VB1 246 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fam162bQ9CX19 157 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp111Q9R164 701 aa12.43□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Adamts17E9Q4D1 1122 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cxcl10P17515 98 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Bmpr1bP36898 502 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rab7aP51150 207 aaKnown RBP12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Reg2Q08731 173 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm1527Q3V0P3 650 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gpank1Q61858 372 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tbpl2Q6SJ95 350 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Pld4Q8BG07 503 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fbxw26Q8BI58 466 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 RetnlgQ8K426 117 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gpa33Q9JKA5 319 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tmem196V9GX04 182 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Plxnb1Q8CJH3 2119 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 DmdP11531 3678 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 MsmpB1AWI6 139 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr906K7N5P3 311 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr467L7N455 308 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mmp23O88676 391 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fcer1gP20491 86 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Ccr2P51683 373 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Rpl30P62889 115 aaKnown RBP12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm10803Q3TZS6 135 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fam57aQ5ND56 257 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vkorc1Q9CRC0 161 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Spry4Q9WTP2 300 aa12.42□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Vmn1r34G3XA52 309 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Bcl2P10417 236 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Ssty1P13675 232 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm813Q3UWK9 176 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Trav3-3Q5R1C3 114 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Msl2Q69ZF8 577 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Defb36Q8K3U4 67 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr959Q9EQ86 311 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tmem9bQ9JJR8 199 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gtf3c1Q8K284 2101 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Trav12d-1A0N8R0 115 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Znf260Q62513 407 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Pef1Q8BFY6 275 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cacng8Q8VHW2 423 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Pbp2Q8VIN1 187 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Syt13Q9EQT6 426 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Try5Q9QUK9 246 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Try4Q9R0T7 246 aa12.41□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp109A0A0U1RPC5 652 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr912A0A1L1SSS5 310 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm14325A2AW67 498 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Zfp114B2RRA8 586 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Cd79aP11911 220 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gabra6P16305 453 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Edn1P22387 202 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Mpc1P63030 109 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Plk3Q60806 631 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Foxg1Q60987 481 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1371Q7TQT7 311 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Defb6Q91VD6 63 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Tmem139E9PX92 214 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr178E9Q9T3 319 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm20767O70517 169 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Gm614Q3V2K1 191 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Fbxl7Q5BJ29 491 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Hide1Q75VT8 222 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Nrn1Q8CFV4 142 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Olfr1102Q8VES2 324 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Egln1Q91YE3 400 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 MmdQ9CQY7 238 aa12.4□□□□□ -0.42
Ushbp1-201ENSMUST00000049184 Prr12E9PYL2 2035 aaKnown RBP12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Gm42791D3YYB5 209 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Inafm1E9PV59 130 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 PpoxP51175 477 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Wdr83osQ6ZWX0 106 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr1246Q7TQZ6 314 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 TprkbQ8QZZ7 175 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr1265Q8VEZ3 309 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr490Q8VFD2 314 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Trav18A0A075B656 109 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Ighv5-2A0A0A6YVX8 117 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Trav23A0A0G2JG17 115 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Hapln4Q80WM4 400 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr1350Q8VF34 308 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Bbc3Q99ML1 193 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Prr15Q9D1T5 122 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 MNCb-2875Q9DCB3 74 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Dock9Q8BIK4 2055 aa12.39□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Wdr1O88342 606 aaKnown RBP12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Hoxa3P02831 443 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Smim6Q3U0I6 56 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Map6Q7TSJ2 906 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Olfr116Q923Q6 321 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Higd1bQ99JY6 98 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Klk1b27Q9JM71 263 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Il17bQ9QXT6 180 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Tusc2Q9WVF8 110 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Sumo3Q9Z172 110 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Gm27027S4R1M6 97 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Trav12d-3A0A075B6A4 115 aa12.38□□□□□ -0.43
Ushbp1-201ENSMUST00000049184 Mettl8A2AUU0 281 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms