RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Mettl27Q8BGM4 238 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Foxj2Q9ES18 565 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm20873J3QMQ9 232 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Hyal2O35632 473 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Il11P47873 199 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1380Q7TQT5 311 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Sox21Q811W0 276 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Acp7Q8BX37 438 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Pf4Q9Z126 105 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm13762A2ATG2 311 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21900J3QP38 180 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Lbx1P52955 282 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gpr87Q99MT7 358 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 P01679 107 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Plppr2Q8VCY8 343 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Errfi1Q99JZ7 461 aa14.38□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Zfp677Q6PEP4 634 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Duxbl2Q7TNE6 350 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1434Q7TQR9 312 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ighv14-4A0A0A6YVR1 117 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tspan7Q62283 249 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1535Q7TQU0 326 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Mzt1Q8BUR9 78 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gpx4Q91XR9 253 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Pbp2Q8VIN1 187 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Rhbdd1Q8BHC7 315 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cldn10Q9Z0S6 231 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gprin2D3Z1D7 455 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tmem139E9PX92 214 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Fam206aQ80ZQ9 193 aaKnown RBP14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Dnajb12Q9QYI4 376 aaKnown RBP14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Alox12bO70582 701 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 March11Q8CBH7 400 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Myct1Q8R411 188 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Q9DAF8 208 aa14.37□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Oxgr1Q6IYF8 337 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Crispld2Q8BZQ2 495 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 BmfQ91ZE9 185 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Atoh7Q9Z2E5 149 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 CortP56469 109 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm28845A0A087WR76 214 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21310J3QQ23 232 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Hoxb1P17919 297 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1181Q7TR18 311 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Otud1Q9CUB6 454 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 SdhcQ9CZB0 169 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 FcrlsQ9EQY5 509 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 CompQ9R0G6 755 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1264Q9R0K2 308 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Prob1A0A087WR45 1010 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Snrpd3P62320 126 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 JPT1P97825 154 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 NrepQ07475 68 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Prdx2Q61171 198 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 DysfQ9ESD7 2090 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tmprss3Q8K1T0 453 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 4933402D24RikQ9D4D3 167 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Wnt5aP22725 380 aa14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Rpl27aP14115 148 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Eif3gQ9Z1D1 320 aaKnown RBP14.36□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm20773A0A0A6YXW2 232 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm20807A0A0A6YXX7 232 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm20795J3QP49 232 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm21440Q3TTD8 232 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tlcd2Q8VC26 310 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 4930412O13RikQ9D5M9 106 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Trav12-2A0N8N6 114 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tmem178bM0QWJ9 172 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 P18529 117 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ubald1Q6P3B2 176 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr1339Q8VGB1 315 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Atp5lQ9CPQ8 103 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 DynapQ9D7M5 161 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm45717A0A1B0GT68 152 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 EnamO55196 1274 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cdkn1bP46414 197 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Atg2aQ6P4T0 1914 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 TracA0A075B662 137 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cd52Q64389 74 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Necap2Q9D1J1 266 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cnn3Q9DAW9 330 aaKnown RBP14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 AicdaQ9WVE0 198 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 H2-M5A7VMS3 348 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ca11O70354 328 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Gm10097J3KMK7 105 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Fam219bQ14DQ1 197 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Cypt1Q8CH20 168 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Ltbp4Q8K4G1 1666 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 MyocosQ3UWS6 143 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Insig2Q91WG1 225 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Tspan32Q9JHH2 256 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Mlf1Q9QWV4 267 aa14.35□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Olfr91Q7TRL3 312 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Sf3b6P59708 125 aaKnown RBP14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Pom121l12A0A1B0GSJ4 278 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Lyl1P27792 278 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Defa20Q45VN2 95 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Adcyap1O70176 175 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Klk1b26P36369 261 aa14.34□□□□□ -0.11
Ccdc88a-201ENSMUST00000040182 Saa1P05366 122 aa14.34□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 46.4 ms