RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 RNF183Q96D59 192 aa2.52□□□□□ -2.01
LPP-222ENST00000640853 FAM231BA6NCW3 169 aa2.52□□□□□ -2.01
LPP-222ENST00000640853 E9PLN8 166 aa2.52□□□□□ -2.01
LPP-222ENST00000640853 SIVA1O15304 175 aa2.52□□□□□ -2.01
LPP-222ENST00000640853 RNASE6Q93091 150 aaKnown RBP2.52□□□□□ -2.01
LPP-222ENST00000640853 LIME1Q9H400 295 aa2.52□□□□□ -2.01
LPP-222ENST00000640853 MBNL3Q9NUK0 354 aaKnown RBP2.52□□□□□ -2.01
LPP-222ENST00000640853 AKAP13Q12802 2813 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 TRAV23DV6A0A075B6W5 121 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SMIM27A0A1W2PRY6 76 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GAGE12BA1L429 117 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CD69Q07108 199 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GAGE2BQ13066 116 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 MLANAQ16655 118 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GAGE2EQ4V326 116 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ZFAND6Q6FIF0 208 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CENPVQ7Z7K6 275 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 IFI27L1Q96BM0 104 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GAGE2DQ9UEU5 116 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 COL24A1Q17RW2 1714 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TRBV20OR9-2A0A075B6H5 130 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TRAV8-1A0A0A6YYK1 113 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 A6NNC1 897 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SAA1P0DJI8 122 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 CDKN1AP38936 164 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 RHOGP84095 191 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SPATA31B1PQ5VZV4 182 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TREML4Q6UXN2 200 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 C8orf31Q8N9H6 132 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GLMPQ8WWB7 406 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 MEGF9Q9H1U4 602 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 C9orf118A6NHY6 69 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 A8MWV9 139 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 OVOL1O14753 267 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 NKAPP1Q8N9T2 125 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 C1orf147Q96MC9 270 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 TRAV8-4A0A0B4J246 113 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 BUB3O43684 328 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 OR9G9P0C7N8 305 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 RAX2Q96IS3 184 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 PCDH15Q96QU1 1955 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SNAI2O43623 268 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 PSG3Q16557 428 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CT83Q5H943 113 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 DENND4AQ7Z401 1863 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 EPG5Q9HCE0 2579 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 OR11H12B2RN74 326 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 F8WDY8 70 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 H3BUT2 72 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 HOXB4P17483 251 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 RIPPLY3P57055 190 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 FOXF2Q12947 444 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 OR11H1Q8NG94 326 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 OR11H2Q8NH07 326 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TMEM14BQ9NUH8 114 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TRAV5A0A0B4J249 113 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 F8WEM9 126 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 IGHV3-23P01764 117 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GATA2P23769 480 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 TPTE2P1Q5T6R2 138 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 UBE2DNLQ8IWF7 75 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 MYOD1P15172 320 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CFHR2P36980 270 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TMEM170BQ5T4T1 132 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CFHR4Q92496 578 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ZNF236Q9UL36 1845 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TRBV7-1A0A0A6YYK4 115 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ZNF329Q86UD4 541 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ZNF114Q8NC26 417 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SLC25A39Q9BZJ4 359 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 SPRR3Q9UBC9 169 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 GATA4P43694 442 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 PLEKHB2Q96CS7 222 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TNS1Q9HBL0 1735 aaKnown RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 IGLV7-46A0A075B6I9 117 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CD177Q8N6Q3 437 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 HS3ST6Q96QI5 342 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 RLFQ13129 1914 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 PAX9P55771 341 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TCTEX1D4Q5JR98 221 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ZCCHC24Q8N2G6 241 aaKnown RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 CEP350Q5VT06 3117 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 H0YJW9 148 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TMEM178BH3BS89 294 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 CRYGCP07315 174 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 B3GALT5-AS1P59052 145 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 MEIG1Q5JSS6 88 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 ITLN2Q8WWU7 325 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 VWA8A3KMH1 1905 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 IGKV2D-26A0A0A0MRZ7 120 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 FOXI3A8MTJ6 420 aaPredicted RBP2.51□□□□□ -2.01
LPP-222ENST00000640853 DERL1Q9BUN8 251 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 SIPA1L1O43166 1804 aa2.51□□□□□ -2.01
LPP-222ENST00000640853 COL11A1P12107 1806 aaPredicted RBP2.5□□□□□ -2.01
LPP-222ENST00000640853 SRSF6Q13247 344 aaKnown RBP2.5□□□□□ -2.01
LPP-222ENST00000640853 KRTAP27-1Q3LI81 207 aa2.5□□□□□ -2.01
LPP-222ENST00000640853 TIMM21Q9BVV7 248 aa2.5□□□□□ -2.01
LPP-222ENST00000640853 PARP14Q460N5 1801 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms