RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 A0A0G2JLM5 398 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 IGLV1-40P01703 118 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 HIST1H1EP10412 219 aaKnown RBP9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 ADMP35318 185 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 AKR1C3P42330 323 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 CFHR3Q02985 330 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 RELQ04864 619 aaPredicted RBP9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 LEMD1Q68G75 181 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 TMEM88Q6PEY1 159 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 C8orf86Q6ZUL3 223 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 BPIFA4PQ86YQ2 179 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 CBLN2Q8IUK8 224 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 TCEAL7Q9BRU2 100 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 RYR2Q92736 4967 aa9.1□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF98A6NK75 572 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 GGTLC3B5MD39 225 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 RPL23P62829 140 aaKnown RBP9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 ADIRFQ15847 76 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 ZNF343Q6P1L6 599 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 BLNKQ8WV28 456 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 GPR61Q9BZJ8 451 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 TUBA4BQ9H853 241 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 PRELID1Q9Y255 219 aa9.09□□□□□ -0.95
ERGIC3-220ENST00000640748 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 CRYBB3P26998 211 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 ARL3P36405 182 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 TOMM20LQ6UXN7 152 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 TMEM190Q8WZ59 177 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 DPF1Q92782 380 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 DUX3Q96PT4 197 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
ERGIC3-220ENST00000640748 PGPA6NDG6 321 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 HELTA6NFD8 242 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 C9JCJ5 164 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 IGHG4P01861 327 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 MYCNOSP40205 109 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 RAB9AP51151 201 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 RANP62826 216 aaKnown RBP9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 SLC35B1P78383 322 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 FAM209BQ5JX69 171 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 ZNF414Q96IQ9 312 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 RAX2Q96IS3 184 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 DERL1Q9BUN8 251 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 MCRIP2Q9BUT9 160 aaKnown RBP9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 CTDSP1Q9GZU7 261 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 KLK15Q9H2R5 256 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 ZNF586Q9NXT0 402 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 LY96Q9Y6Y9 160 aa9.07□□□□□ -0.96
ERGIC3-220ENST00000640748 IGHV3-35A0A0C4DH35 117 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 PPP5D1E7EU14 171 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 PEX7O00628 323 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 TSPAN4O14817 238 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 MRPS12O15235 138 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 SLC25A5P05141 298 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 SNRPCP09234 159 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 RPL7P18124 248 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 RPL35P42766 123 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 TAS2R60P59551 318 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 RNF212Q495C1 297 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 KLHL30-AS1Q8NEE0 82 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 C2CD4CQ8TF44 421 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 HIST1H2BAQ96A08 127 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 Q9H3A6 140 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 OTORQ9NRC9 128 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 TMEM242Q9NWH2 141 aa9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 TMA7Q9Y2S6 64 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-220ENST00000640748 HUWE1Q7Z6Z7 4374 aaKnown RBP9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 TRBV19A0A075B6N1 114 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 NDUFA4O00483 81 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 IGHV3-11P01762 117 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 ELANEP08246 267 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 IGLC2P0DOY2 106 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 PSMB8P28062 276 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 LINC01551Q86U37 167 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 OR8I2Q8N0Y5 310 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 LYPD1Q8N2G4 141 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 C5orf17Q8NAS9 161 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 ANAPC16Q96DE5 110 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 METTL26Q96S19 204 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 EPDR1Q9UM22 224 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 U3KQK5 164 aa9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 DYNC2H1Q8NCM8 4307 aaKnown RBP9.05□□□□□ -0.96
ERGIC3-220ENST00000640748 H3BTX0 84 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 CCL24O00175 119 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 PPP1R2P9O14990 202 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 ATF4P18848 351 aaPredicted RBP9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 GNG4P50150 75 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 FOXE3Q13461 319 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 PDE6HQ13956 83 aa9.04□□□□□ -0.96
ERGIC3-220ENST00000640748 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms