RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 FAM90A27PA6NNH2 459 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 H3BTX0 84 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 CSRP1P21291 193 aaKnown RBP6.77□□□□□ -1.33
NECAP1-227ENST00000640648 CXCL5P42830 114 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 ATP1A1-AS1Q5TC04 95 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 FAM57AQ8TBR7 257 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 KLF14Q8TD94 323 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-227ENST00000640648 ITLN1Q8WWA0 313 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 CD69Q07108 199 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 FOXA2Q9Y261 457 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-227ENST00000640648 C5orf63A6NC05 138 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 PRSS46E5RG02 174 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 MGPP08493 103 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 PVRIGQ6DKI7 326 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 DTX2Q86UW9 622 aa6.77□□□□□ -1.33
NECAP1-227ENST00000640648 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 DUSP14O95147 198 aaKnown RBP6.76□□□□□ -1.33
NECAP1-227ENST00000640648 LRRK1Q38SD2 2015 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 HEATR1Q9H583 2144 aaKnown RBP6.76□□□□□ -1.33
NECAP1-227ENST00000640648 WDR90Q96KV7 1748 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 SPAARA0A1B0GVQ0 90 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 SOCS3O14543 225 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 EFNA2O43921 213 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 FAM104BQ5XKR9 115 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 PHLDA3Q9Y5J5 127 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 D6R8Y8 96 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 KHDC1LQ5JSQ8 128 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 SH2D6Q7Z4S9 175 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 DCTN5Q9BTE1 182 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 A0A1B0GUS0 222 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 C17orf98A8MV24 154 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 C12orf77C9JDV5 145 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 PAX9P55771 341 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 PRCDQ00LT1 54 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 SLC25A53Q5H9E4 307 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 SLC50A1Q9BRV3 221 aa6.76□□□□□ -1.33
NECAP1-227ENST00000640648 TSC2P49815 1807 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 DOCK11Q5JSL3 2073 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 F8VRH5 84 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 H3BQ85 93 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 CD3EP07766 207 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 IFI27P40305 119 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-227ENST00000640648 RPL39P5Q59GN2 51 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 ZNRF1Q8ND25 227 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 CALYQ9NYX4 217 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 M0QXV9 152 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 LY6DQ14210 128 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 ABCA4P78363 2273 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 TRBV10-2A0A0K0K1G8 114 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 IQCF6A8MYZ5 107 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 NDUFC1O43677 76 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 TCRAP04437 139 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 NTN5Q8WTR8 489 aaPredicted RBP6.75□□□□□ -1.33
NECAP1-227ENST00000640648 VSIG2Q96IQ7 327 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 IGKV3-7A0A075B6H7 116 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 IGKV1-12A0A0C4DH73 117 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 IGKV1D-12P01611 117 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 FHL1Q13642 323 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 RCHY1Q96PM5 261 aa6.75□□□□□ -1.33
NECAP1-227ENST00000640648 RPUSD1Q9UJJ7 312 aaKnown RBP6.75□□□□□ -1.33
NECAP1-227ENST00000640648 TM4SF5O14894 197 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 CFC1BP0CG36 223 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 CFC1P0CG37 223 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 CRYGSP22914 178 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 ID1P41134 155 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 C19orf54Q5BKX5 351 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 NABP1Q96AH0 204 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 CACNA1BQ00975 2339 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 hADV29S1A0JD25 119 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 LYRM9A8MSI8 78 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 CFHR1Q03591 330 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 REPIN1Q9BWE0 567 aaKnown RBP6.74□□□□□ -1.33
NECAP1-227ENST00000640648 PEMTQ9UBM1 199 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 SIGLEC9Q9Y336 463 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 PLXND1Q9Y4D7 1925 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 ZSWIM8A7E2V4 1837 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 FAM240AA0A1B0GVK7 77 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 C2orf70A6NJV1 201 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 LMO1P25800 156 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 PEAR1Q5VY43 1037 aaPredicted RBP6.74□□□□□ -1.33
NECAP1-227ENST00000640648 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 FGFBP3Q8TAT2 258 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 ZNF581Q9P0T4 197 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 METRNQ9UJH8 293 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 A0A087WX48 190 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 FAM236AA0A1B0GUQ0 79 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 FAM236BA0A1B0GV22 79 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 NUPR1O60356 82 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 IGHG2P01859 326 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 TFF1P04155 84 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 TMEM75Q8N9X5 138 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 TRGV9Q99603 122 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 TMEM243Q9BU79 118 aa6.74□□□□□ -1.33
NECAP1-227ENST00000640648 ZFP36L1Q07352 338 aaKnown RBP6.73□□□□□ -1.33
NECAP1-227ENST00000640648 FAM201AQ5SY85 155 aa6.73□□□□□ -1.33
NECAP1-227ENST00000640648 ZNF441Q8N8Z8 693 aa6.73□□□□□ -1.33
NECAP1-227ENST00000640648 UBL5Q9BZL1 73 aa6.73□□□□□ -1.33
NECAP1-227ENST00000640648 UPK2O00526 184 aa6.73□□□□□ -1.33
NECAP1-227ENST00000640648 GATA2P23769 480 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms