RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 TPSG1Q9NRR2 321 aa14.14□□□□□ -0.15
SCARB2-223ENST00000640640 CRXO43186 299 aaPredicted RBP14.14□□□□□ -0.15
SCARB2-223ENST00000640640 ZNF138P52744 262 aa14.14□□□□□ -0.15
SCARB2-223ENST00000640640 LCN12Q6JVE5 192 aa14.14□□□□□ -0.15
SCARB2-223ENST00000640640 C9orf139Q6ZV77 190 aa14.14□□□□□ -0.15
SCARB2-223ENST00000640640 TRAV9-2A0A087WT02 112 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 PSMG4Q5JS54 123 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 LYZL1Q6UWQ5 148 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 FAM181BA6NEQ2 426 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 TMEM131Q92545 1883 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 C10orf91Q5T1B1 145 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 CYB5R2Q6BCY4 276 aa14.13□□□□□ -0.15
SCARB2-223ENST00000640640 PSMB11A5LHX3 300 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 WFDC12Q8WWY7 111 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 LAMTOR2Q9Y2Q5 125 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 COX6CP09669 75 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 EVI2AP22794 236 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 CACNG7P62955 275 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 TTC9CQ8N5M4 171 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 SONP18583 2426 aaKnown RBP14.12□□□□□ -0.15
SCARB2-223ENST00000640640 MYO18BQ8IUG5 2567 aa14.12□□□□□ -0.15
SCARB2-223ENST00000640640 USMG5Q96IX5 58 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 PRO3102Q9H379 93 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 IGKV3OR2-268A0A0C4DH90 116 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 PDE6HQ13956 83 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 NDUFS8O00217 210 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 ATP6V0E1O15342 81 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 ZNF688P0C7X2 276 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 SPRNQ5BIV9 151 aa14.11□□□□□ -0.15
SCARB2-223ENST00000640640 A6NNC1 897 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 NDUFB8O95169 186 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 Q86TA4 180 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 CTSZQ9UBR2 303 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 D6R8Y8 96 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 NCR2O95944 276 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 SLC25A16P16260 332 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 IFI27L1Q96BM0 104 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 ST20Q9HBF5 79 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 TNCP24821 2201 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 GGTLC3B5MD39 225 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 SRSF1Q07955 248 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCARB2-223ENST00000640640 CIRBPQ14011 172 aaKnown RBP14.1□□□□□ -0.15
SCARB2-223ENST00000640640 SH2D1AO60880 128 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 GRNP28799 593 aaKnown RBP14.1□□□□□ -0.15
SCARB2-223ENST00000640640 YPEL3P61236 119 aaPredicted RBP14.1□□□□□ -0.15
SCARB2-223ENST00000640640 RUSC1-AS1Q66K80 236 aa14.1□□□□□ -0.15
SCARB2-223ENST00000640640 LHBP01229 141 aa14.09□□□□□ -0.15
SCARB2-223ENST00000640640 MSMBP08118 114 aa14.09□□□□□ -0.15
SCARB2-223ENST00000640640 SUMO2P61956 95 aaKnown RBP14.09□□□□□ -0.15
SCARB2-223ENST00000640640 PEF1Q9UBV8 284 aaKnown RBP14.09□□□□□ -0.15
SCARB2-223ENST00000640640 MED12LQ86YW9 2145 aa14.08□□□□□ -0.15
SCARB2-223ENST00000640640 WISP2O76076 250 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 NDUFA3O95167 84 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 IGHV2-70DA0A0C4DH43 119 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 FAM223BA6NKX1 122 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 FAM223AQ8IWN6 122 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 FAM110DQ8TAY7 271 aaPredicted RBP14.08□□□□□ -0.16
SCARB2-223ENST00000640640 ALPK3Q96L96 1907 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 G3V318 75 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 STHQ8IWL8 128 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 ARL6IP6Q8N6S5 226 aa14.08□□□□□ -0.16
SCARB2-223ENST00000640640 EML6Q6ZMW3 1958 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 SMIM13P0DJ93 91 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 PLP1P60201 277 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 MEIG1Q5JSS6 88 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 SEM1Q6ZVN7 128 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 LYPD6BQ8NI32 183 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 RHPN1-AS1Q9BWJ2 59 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 C22orf46C9J442 243 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 ORMDL2Q53FV1 153 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 SMIM12Q96EX1 92 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 LINC00477Q96M19 166 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 CYSLTR1Q9Y271 337 aa14.07□□□□□ -0.16
SCARB2-223ENST00000640640 WNK1Q9H4A3 2382 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 OVOL3O00110 214 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PRR20EP86478 221 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PRR20CP86479 221 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PRR20DP86480 221 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PRR20BP86481 221 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PRR20AP86496 221 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 JKAMPQ9P055 326 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 TRGV2A0A075B6R0 118 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 IGHV1-69DA0A0B4J2H0 117 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 IGHV1-69P01742 117 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 PIP4P2Q8N4L2 257 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 LINC01356Q8N9X3 169 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 SLC25A2Q9BXI2 301 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 CCDC168Q8NDH2 2452 aa14.06□□□□□ -0.16
SCARB2-223ENST00000640640 NDUFS7O75251 213 aa14.05□□□□□ -0.16
SCARB2-223ENST00000640640 FCN3O75636 299 aa14.05□□□□□ -0.16
SCARB2-223ENST00000640640 MRPL27Q9P0M9 148 aaKnown RBP14.05□□□□□ -0.16
SCARB2-223ENST00000640640 C3orf79P0CE67 100 aa14.05□□□□□ -0.16
SCARB2-223ENST00000640640 ZNF114Q8NC26 417 aa14.05□□□□□ -0.16
SCARB2-223ENST00000640640 TRBV19A0A075B6N1 114 aa14.05□□□□□ -0.16
SCARB2-223ENST00000640640 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
SCARB2-223ENST00000640640 DPM2O94777 84 aa14.04□□□□□ -0.16
SCARB2-223ENST00000640640 TMEM8BA6NDV4 472 aa14.04□□□□□ -0.16
SCARB2-223ENST00000640640 IGLC1P0CG04 106 aa14.04□□□□□ -0.16
SCARB2-223ENST00000640640 JMJD8Q96S16 334 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms