RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-238	ENST00000640421	FAM74A7	A6NL05	159 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	ZNF785	A8K8V0	405 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421		M0QZ24	198 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	SAP30	O75446	220 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	BMI1	P35226	326 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	SRSF3	P84103	164 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	PMS2P11	Q13670	270 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	IGFL4	Q6B9Z1	124 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	FAM210A	Q96ND0	272 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	HELT	A6NFD8	242 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	GGTLC3	B5MD39	225 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	RAN	P62826	216 aa	Known RBP	13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	CD300E	Q496F6	205 aa	Predicted RBP	13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	TOR2A	Q5JU69	321 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	TMEM61	Q8N0U2	210 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	GBGT1	Q8N5D6	347 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	DYNLRB2	Q8TF09	96 aa		13.36	□□□□□ -0.27
SPIN3-238	ENST00000640421	SORL1	Q92673	2214 aa		13.35	□□□□□ -0.27
SPIN3-238	ENST00000640421	IZUMO1R	A6ND01	250 aa		13.35	□□□□□ -0.27
SPIN3-238	ENST00000640421	BCL2	P10415	239 aa		13.35	□□□□□ -0.27
SPIN3-238	ENST00000640421	ATP5G3	P48201	142 aa		13.35	□□□□□ -0.27
SPIN3-238	ENST00000640421	NRN1	Q9NPD7	142 aa		13.35	□□□□□ -0.27
SPIN3-238	ENST00000640421	LOC102723971	A0A1B0GUV8	181 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	RBFOX3	A6NFN3	312 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	SOCS3	O14543	225 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	PRB4	P10163	310 aa	Predicted RBP	13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	EXOC3-AS1	Q8N2X6	119 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	MS4A6A	Q9H2W1	248 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	MANBAL	Q9NQG1	85 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	MED9	Q9NWA0	146 aa		13.34	□□□□□ -0.27
SPIN3-238	ENST00000640421	TRAV8-2	A0A0B4J237	113 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	HLA-DMB	P28068	263 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	PDE6H	Q13956	83 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	ICAM4	Q14773	271 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	GUK1	Q16774	197 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	COMMD7	Q86VX2	200 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	WFDC9	Q8NEX5	89 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	DCANP1	Q8TF63	244 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421		Q9H3A6	140 aa		13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.33	□□□□□ -0.27
SPIN3-238	ENST00000640421		A0A1W2PRE2	83 aa		13.33	□□□□□ -0.28
SPIN3-238	ENST00000640421	IGLV1-51	P01701	117 aa		13.33	□□□□□ -0.28
SPIN3-238	ENST00000640421	TFPI2	P48307	235 aa		13.33	□□□□□ -0.28
SPIN3-238	ENST00000640421	CST9LP1	Q5W188	147 aa		13.33	□□□□□ -0.28
SPIN3-238	ENST00000640421		C9JQL5	133 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	PPT1	P50897	306 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	ZNF506	Q5JVG8	444 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	WFDC3	Q8IUB2	231 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	FAM24B	Q8N5W8	94 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	RNF182	Q8N6D2	247 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	RXFP4	Q8TDU9	374 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	EIF5A2	Q9GZV4	153 aa	Known RBP	13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	ARL2-SNX15	V9GYD0	113 aa		13.32	□□□□□ -0.28
SPIN3-238	ENST00000640421	C11orf94	C9JXX5	98 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	IFNA1	P01562	189 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	CD33	P20138	364 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	CD81	P60033	236 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	SUMO1	P63165	101 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	CCDC28A	Q8IWP9	274 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	SLC7A5P1	Q8MH63	180 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421		M0R3E3	92 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	TSPAN4	O14817	238 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	ZNF253	O75346	499 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	MEF2B	Q02080	365 aa	Predicted RBP	13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	C20orf173	Q96LM9	149 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	VAX2	Q9UIW0	290 aa		13.31	□□□□□ -0.28
SPIN3-238	ENST00000640421	PGP	A6NDG6	321 aa		13.3	□□□□□ -0.28
SPIN3-238	ENST00000640421	CD5	P06127	495 aa		13.3	□□□□□ -0.28
SPIN3-238	ENST00000640421	MEOX2	P50222	304 aa		13.3	□□□□□ -0.28
SPIN3-238	ENST00000640421	C16orf92	Q96LL3	132 aa		13.3	□□□□□ -0.28
SPIN3-238	ENST00000640421	DNAH3	Q8TD57	4116 aa		13.3	□□□□□ -0.28
SPIN3-238	ENST00000640421	RAB19	A4D1S5	217 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421		K7EQG2	157 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	IGLL1	P15814	213 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	OTOR	Q9NRC9	128 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	GNG5	P63218	68 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	PSG9	Q00887	426 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	LYPD1	Q8N2G4	141 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	SLC50A1	Q9BRV3	221 aa		13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	ZNF256	Q9Y2P7	627 aa	Predicted RBP	13.29	□□□□□ -0.28
SPIN3-238	ENST00000640421	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIN3-238	ENST00000640421	DNASE2	O00115	360 aa	Predicted RBP	13.28	□□□□□ -0.28
SPIN3-238	ENST00000640421	DEFB1	P60022	68 aa		13.27	□□□□□ -0.28
SPIN3-238	ENST00000640421	C9orf66	Q5T8R8	295 aa		13.27	□□□□□ -0.28
SPIN3-238	ENST00000640421	AAMDC	Q9H7C9	122 aa		13.27	□□□□□ -0.28
SPIN3-238	ENST00000640421	TRAV25	A0A0B4J276	109 aa		13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	SCO2	A0A1W2PP80	73 aa		13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	ISLR	O14498	428 aa		13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	SLC25A5	P05141	298 aa	Known RBP	13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	EIF4E3	Q8N5X7	224 aa	Known RBP	13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	SPAG8	Q99932	426 aa	Predicted RBP	13.27	□□□□□ -0.29
SPIN3-238	ENST00000640421	NBEAL1	Q6ZS30	2694 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	PRAC2	D3DTV9	90 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	SRP19	P09132	144 aa	Known RBP	13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	ZNF688	P0C7X2	276 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	TAGLN2	P37802	199 aa	Known RBP	13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	PAFAH1B2	P68402	229 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	GUCA2B	Q16661	112 aa		13.26	□□□□□ -0.29
SPIN3-238	ENST00000640421	NKX6-2	Q9C056	277 aa	Predicted RBP	13.26	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms