RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 MRPL52Q86TS9 123 aaKnown RBP13.42□□□□□ -0.26
SCARB2-210ENST00000638567 NCOR1P1Q9H4R4 102 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 SMKR1H3BMG3 65 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 HSD52Q0P140 79 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 ZNF833PQ6ZTB9 187 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
SCARB2-210ENST00000638567 DIAPH2-AS1Q14236 149 aa13.41□□□□□ -0.26
SCARB2-210ENST00000638567 COA6Q5JTJ3 125 aaKnown RBP13.41□□□□□ -0.26
SCARB2-210ENST00000638567 ZNF418Q8TF45 676 aaPredicted RBP13.41□□□□□ -0.26
SCARB2-210ENST00000638567 SNCGO76070 127 aa13.41□□□□□ -0.26
SCARB2-210ENST00000638567 SRSF1Q07955 248 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCARB2-210ENST00000638567 VWC2Q2TAL6 325 aa13.41□□□□□ -0.26
SCARB2-210ENST00000638567 IGKCP01834 107 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 UBE2V1Q13404 147 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 RCHY1Q96PM5 261 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 SHANK2-AS3Q9BTD1 123 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 IGLV3-9A0A075B6K5 115 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 IFI27P40305 119 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-210ENST00000638567 LYPD1Q8N2G4 141 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 JMJD8Q96S16 334 aa13.4□□□□□ -0.26
SCARB2-210ENST00000638567 TMEM249Q2WGJ8 235 aa13.4□□□□□ -0.27
SCARB2-210ENST00000638567 GTSCR1Q86UQ5 136 aa13.4□□□□□ -0.27
SCARB2-210ENST00000638567 Q8TCH9 128 aa13.4□□□□□ -0.27
SCARB2-210ENST00000638567 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 FAM168AQ92567 244 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 CCL19Q99731 98 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 MRPS16Q9Y3D3 137 aaKnown RBP13.39□□□□□ -0.27
SCARB2-210ENST00000638567 PTPRQQ9UMZ3 2332 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 LOXP28300 417 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-210ENST00000638567 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 TMEM219Q86XT9 240 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 OR9G4Q8NGQ1 327 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 LSM4Q9Y4Z0 139 aaKnown RBP13.39□□□□□ -0.27
SCARB2-210ENST00000638567 PAX8Q06710 450 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 POU2AF1Q16633 256 aa13.39□□□□□ -0.27
SCARB2-210ENST00000638567 GEMIN7Q9H840 131 aaKnown RBP13.39□□□□□ -0.27
SCARB2-210ENST00000638567 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
SCARB2-210ENST00000638567 Q6ZPA2 131 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 FAM231DQ6ZW35 169 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 TGFAP01135 160 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 CD7P09564 240 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 NPSP0C0P6 89 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 TECTAO75443 2155 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 LTBP2Q14767 1821 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 SMIM27A0A1W2PRY6 76 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 DUX5Q96PT3 197 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 FAM215AQ9Y5M1 114 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 GFRA4Q9GZZ7 299 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 C11orf1Q9H5F2 150 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 ZNF492Q9P255 531 aa13.38□□□□□ -0.27
SCARB2-210ENST00000638567 TMEM213A2RRL7 107 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 NUPR1O60356 82 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 UNQ6494/PRO21346Q6UXR6 183 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 MED12LQ86YW9 2145 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 SRD5A1P18405 259 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 NDPQ00604 133 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 BCL6BQ8N143 479 aaPredicted RBP13.37□□□□□ -0.27
SCARB2-210ENST00000638567 IGLL1P15814 213 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 STPG4Q8N801 248 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 RAX2Q96IS3 184 aa13.37□□□□□ -0.27
SCARB2-210ENST00000638567 WFDC12Q8WWY7 111 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 COX11Q9Y6N1 276 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 CT83Q5H943 113 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 SIGLEC15Q6ZMC9 328 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 IGLV2-14P01704 120 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 ORMDL2Q53FV1 153 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 SSBP2P81877 361 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-210ENST00000638567 PRR30Q53SZ7 412 aaPredicted RBP13.36□□□□□ -0.27
SCARB2-210ENST00000638567 TEX43Q6ZNM6 134 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 TMEM190Q8WZ59 177 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 FXYD5Q96DB9 178 aa13.36□□□□□ -0.27
SCARB2-210ENST00000638567 TRAV40A0A0B4J280 105 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 PAX1P15863 534 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 RIPPLY3P57055 190 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 TEX36Q5VZQ5 186 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 DENND4AQ7Z401 1863 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 PSMB11A5LHX3 300 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 FAM231BA6NCW3 169 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 C19orf54Q5BKX5 351 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 SAMD5Q5TGI4 173 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 CYSLTR1Q9Y271 337 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 TRBV19A0A075B6N1 114 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 ZC2HC1BQ5TFG8 222 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 DEFB104AQ8WTQ1 72 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 ZNF479Q96JC4 524 aa13.35□□□□□ -0.27
SCARB2-210ENST00000638567 TRAV41A0A0B4J266 112 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 CEACAM8P31997 349 aaPredicted RBP13.34□□□□□ -0.27
SCARB2-210ENST00000638567 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 OOSP1A8MZH6 123 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 PLA2G5P39877 138 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 LAGE3Q14657 143 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 MINOS1Q5TGZ0 78 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 TNFRSF18Q9Y5U5 241 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 MINOS1-NBL1R4GNA1 71 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 OR5A1Q8NGJ0 315 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 CHTOPQ9Y3Y2 248 aaKnown RBP13.34□□□□□ -0.27
SCARB2-210ENST00000638567 EML6Q6ZMW3 1958 aa13.34□□□□□ -0.27
SCARB2-210ENST00000638567 H7C1H1 209 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms