RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 ABCA11PQ4W5N1 156 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 C1orf195Q5TG92 126 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 Q8N7P7 452 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 GATD1Q8NB37 220 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 DUX3Q96PT4 197 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 SLC35B3Q9H1N7 401 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 NAA60Q9H7X0 242 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 TUBA4BQ9H853 241 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 LINC00574Q9H8X3 128 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 SVEP1Q4LDE5 3571 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 DSCAML1Q8TD84 2053 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 PDCD6O75340 191 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 IFNA17P01571 189 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 SEC11BP0C7V7 166 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 CGB3P0DN86 165 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 CGB7P0DN87 165 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF497Q6ZNH5 498 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 LINC00173Q6ZV60 143 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 TCF23Q7RTU1 214 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 SMIM20Q8N5G0 67 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 Q8WTZ3 238 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 YPEL4Q96NS1 127 aa5.83□□□□□ -1.48
SCARB2-209ENST00000638409 NSD1Q96L73 2696 aaPredicted RBP5.83□□□□□ -1.48
SCARB2-209ENST00000638409 ODAMA1E959 279 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 FAM181BA6NEQ2 426 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 PHOX2AO14813 284 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 NUDT3O95989 172 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 PRSS1P07477 247 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 OMGP23515 440 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 PRTN3P24158 256 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 HEPN1Q6WQI6 88 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 RTN4IP1Q8WWV3 396 aaPredicted RBP5.82□□□□□ -1.48
SCARB2-209ENST00000638409 DOK5Q9P104 306 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 RBFOX3A6NFN3 312 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 FAM24AA6NFZ4 105 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 CXCL1P09341 107 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 NBEAP1P0C6P0 100 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 ESDP10768 282 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 EDDM3BP56851 147 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 KHDC3LQ587J8 217 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 PBDC1Q9BVG4 233 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 ARHGAP32A7KAX9 2087 aa5.82□□□□□ -1.48
SCARB2-209ENST00000638409 TRGV10A0A0A0MS01 117 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 TRAV8-4A0A0B4J246 113 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 TMEM30CPA0ZSE6 113 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 IGSF23A1L1A6 192 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 LINC01619G3V211 115 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 PROP1O75360 226 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 P01737 135 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 PFN2P35080 140 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 BAXQ07812 192 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 EDDM3AQ14507 147 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 GFI1BQ5VTD9 330 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 VMO1Q7Z5L0 202 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 NFE4Q86UQ8 179 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 NIT1Q86X76 327 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF664Q8N3J9 261 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 BLNKQ8WV28 456 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF714Q96N38 554 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 IGHV3OR16-13A0A075B7E8 117 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 TRBV6-6A0A0A6YYG2 114 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 H3BQ15 152 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 IGLL1P15814 213 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 GZMHP20718 246 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 PPP1R27Q86WC6 154 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 SLC35G3Q8N808 338 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 OR2G3Q8NGZ4 309 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 TP53RKQ96S44 253 aa5.81□□□□□ -1.48
SCARB2-209ENST00000638409 CCL3L1P16619 93 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 ATP6V0CP27449 155 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 HCP5Q6MZN7 132 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 ZNF880Q6PDB4 577 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 HIST3H2BBQ8N257 126 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 SIGLEC9Q9Y336 463 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 M0R143 59 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 SSSCA1O60232 199 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 NAPSAO96009 420 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 IGHV1-8P0DP01 117 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 SRP14P37108 136 aaKnown RBP5.8□□□□□ -1.48
SCARB2-209ENST00000638409 RUNX1Q01196 453 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 SPSB3Q6PJ21 355 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 OR11H6Q8NGC7 330 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 MRPL30Q8TCC3 161 aaKnown RBP5.8□□□□□ -1.48
SCARB2-209ENST00000638409 VSIRQ9H7M9 311 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 EDA2RQ9HAV5 297 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 XCL2Q9UBD3 114 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 HIVEP2P31629 2446 aa5.8□□□□□ -1.48
SCARB2-209ENST00000638409 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 C15orf65H3BRN8 121 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 TCF21O43680 179 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 IGHV1-69P01742 117 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 SRP19P09132 144 aaKnown RBP5.79□□□□□ -1.48
SCARB2-209ENST00000638409 METTL15P1P0C7V9 234 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 FABP4P15090 132 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 SRPXP78539 464 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 ELOBQ15370 118 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 SRSF7Q16629 238 aaKnown RBP eCLIP5.79□□□□□ -1.48
SCARB2-209ENST00000638409 CYB561D1Q8N8Q1 229 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 GALNT14Q96FL9 552 aa5.79□□□□□ -1.48
SCARB2-209ENST00000638409 SIGMAR1Q99720 223 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms