RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 PKD1L2Q7Z442 2459 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 IGHV4-61A0A0C4DH41 118 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 CAMPP49913 170 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 ATP5J2P56134 94 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 KLF5Q13887 457 aaPredicted RBP14.44□□□□□ -0.1
CLN8-211ENST00000636934 FAM162BQ5T6X4 162 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 ATP6V0BQ99437 205 aa14.44□□□□□ -0.1
CLN8-211ENST00000636934 TACC2O95359 2948 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 TRBV7-1A0A0A6YYK4 115 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 F2Z2F3 143 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 GPX1P07203 203 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 CT45A10P0DMU9 189 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 GPR183P32249 361 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 GTSF1Q8WW33 167 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 PGLYRP4Q96LB8 373 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 MEGF9Q9H1U4 602 aa14.43□□□□□ -0.1
CLN8-211ENST00000636934 PAX1P15863 534 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 GDF5OSQ5U4N7 250 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 Q6ZWC4 215 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 BCL6BQ8N143 479 aaPredicted RBP14.42□□□□□ -0.1
CLN8-211ENST00000636934 ZNF664Q8N3J9 261 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 ZC2HC1AQ96GY0 325 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 A8MWP6 167 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 FOXA3P55318 350 aaPredicted RBP14.42□□□□□ -0.1
CLN8-211ENST00000636934 DSCR9P59020 149 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 Q6AWC8 147 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 TOMM20LQ6UXN7 152 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 C18orf32Q8TCD1 76 aa14.42□□□□□ -0.1
CLN8-211ENST00000636934 A0A1W2PS18 150 aa14.41□□□□□ -0.1
CLN8-211ENST00000636934 ZNF705FA8MVS1 300 aaPredicted RBP14.41□□□□□ -0.1
CLN8-211ENST00000636934 CLEC3BP05452 202 aa14.41□□□□□ -0.1
CLN8-211ENST00000636934 ZNF705DP0CH99 300 aaPredicted RBP14.41□□□□□ -0.1
CLN8-211ENST00000636934 ZNF705BP0CI00 300 aaPredicted RBP14.41□□□□□ -0.1
CLN8-211ENST00000636934 AMTP48728 403 aa14.41□□□□□ -0.1
CLN8-211ENST00000636934 CRIP2P52943 208 aaPredicted RBP14.41□□□□□ -0.1
CLN8-211ENST00000636934 SAPCD1Q5SSQ6 148 aa14.41□□□□□ -0.1
CLN8-211ENST00000636934 A0A1B0GW15 77 aa14.4□□□□□ -0.1
CLN8-211ENST00000636934 M0R3E3 92 aa14.4□□□□□ -0.1
CLN8-211ENST00000636934 HAX1O00165 279 aa14.4□□□□□ -0.1
CLN8-211ENST00000636934 ZNF324O75467 553 aaPredicted RBP14.4□□□□□ -0.1
CLN8-211ENST00000636934 RELQ04864 619 aaPredicted RBP14.4□□□□□ -0.1
CLN8-211ENST00000636934 ALKBH7Q9BT30 221 aaPredicted RBP14.4□□□□□ -0.1
CLN8-211ENST00000636934 EPG5Q9HCE0 2579 aa14.4□□□□□ -0.1
CLN8-211ENST00000636934 A0A087X0K7 114 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 TRAV41A0A0B4J266 112 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 TRAV40A0A0B4J280 105 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 FAM223BA6NKX1 122 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 CHEK1O14757 476 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 ATP5G2Q06055 141 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 REC114Q7Z4M0 266 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 FAM223AQ8IWN6 122 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 ZFAND3Q9H8U3 227 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 G3V318 75 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 RIGQ13278 110 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 C1orf194Q5T5A4 169 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 COX8CQ7Z4L0 72 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 RCHY1Q96PM5 261 aa14.39□□□□□ -0.11
CLN8-211ENST00000636934 PMCHP20382 165 aa14.38□□□□□ -0.11
CLN8-211ENST00000636934 FAM209BQ5JX69 171 aa14.38□□□□□ -0.11
CLN8-211ENST00000636934 CLEC19AQ6UXS0 136 aa14.38□□□□□ -0.11
CLN8-211ENST00000636934 BORCS7Q96B45 105 aa14.38□□□□□ -0.11
CLN8-211ENST00000636934 SSBP4Q9BWG4 385 aaPredicted RBP14.38□□□□□ -0.11
CLN8-211ENST00000636934 NRN1Q9NPD7 142 aa14.38□□□□□ -0.11
CLN8-211ENST00000636934 IGHV3OR16-10A0A075B7F0 116 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 A0A1B0GUT8 65 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 SH2D7A6NKC9 451 aaPredicted RBP14.37□□□□□ -0.11
CLN8-211ENST00000636934 ZNF785A8K8V0 405 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 MSMBP08118 114 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 TMEM219Q86XT9 240 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 CCDC140Q96MF4 163 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 SMAD5-AS1Q9Y6J3 95 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 IGHV4-30-2A0A087WSY4 118 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 M0QZK8 103 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 PIFOQ8TCI5 191 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 METTL26Q96S19 204 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 SLC50A1Q9BRV3 221 aa14.37□□□□□ -0.11
CLN8-211ENST00000636934 LINC01548A6NM66 108 aa14.36□□□□□ -0.11
CLN8-211ENST00000636934 BUB3O43684 328 aa14.36□□□□□ -0.11
CLN8-211ENST00000636934 HSBP1O75506 76 aa14.36□□□□□ -0.11
CLN8-211ENST00000636934 C19orf54Q5BKX5 351 aa14.36□□□□□ -0.11
CLN8-211ENST00000636934 BRD3OSQ6XYD6 125 aa14.36□□□□□ -0.11
CLN8-211ENST00000636934 KMT2BQ9UMN6 2715 aaPredicted RBP14.36□□□□□ -0.11
CLN8-211ENST00000636934 GATA3P23771 443 aa14.35□□□□□ -0.11
CLN8-211ENST00000636934 CYB5R2Q6BCY4 276 aa14.35□□□□□ -0.11
CLN8-211ENST00000636934 TEX43Q6ZNM6 134 aa14.35□□□□□ -0.11
CLN8-211ENST00000636934 C14orf144Q96I85 54 aa14.35□□□□□ -0.11
CLN8-211ENST00000636934 NDFIP1Q9BT67 221 aa14.35□□□□□ -0.11
CLN8-211ENST00000636934 B4DSR2 109 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 H3BUA1 57 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 BRI3O95415 125 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 APOHP02749 345 aaPredicted RBP14.34□□□□□ -0.11
CLN8-211ENST00000636934 RPS20P60866 119 aaKnown RBP14.34□□□□□ -0.11
CLN8-211ENST00000636934 KRTDAPP60985 99 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 DMRTA1Q5VZB9 504 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 GATD1Q8NB37 220 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 NDUFAF3Q9BU61 184 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 LOC102724200A0A096LPH7 203 aaPredicted RBP14.34□□□□□ -0.11
CLN8-211ENST00000636934 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.34□□□□□ -0.11
CLN8-211ENST00000636934 IGHV3-35A0A0C4DH35 117 aa14.34□□□□□ -0.11
CLN8-211ENST00000636934 KIR2DL5BA0A0G2JN68 375 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms