RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 LINC00271P0C7V0 271 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 ANKRD39Q53RE8 183 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 IGFL4Q6B9Z1 124 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 Q96MF0 132 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 IFI27L1Q96BM0 104 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 Q0VFX4 171 aa13.11□□□□□ -0.31
CACNA1A-221ENST00000636012 TINCRA0A1B0GVN0 87 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 GAGE12JA6NER3 117 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 GAGE1Q13065 139 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 GAGE4Q13068 117 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 GAGE5Q13069 117 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 GAGE6Q13070 117 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 NXPH4O95158 308 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 MINOS1Q5TGZ0 78 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 VWCEQ96DN2 955 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 MINOS1-NBL1R4GNA1 71 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 TRAV9-1A0A075B6T8 112 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 PPBPP02775 128 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 DAD1P61803 113 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 WFDC9Q8NEX5 89 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 C1QTNF4Q9BXJ3 329 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 ZNF319Q9P2F9 582 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 D6R8Y8 96 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 A0A087WWL8 130 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 BUB1B-PAK6H3BSN5 160 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 LCN12Q6JVE5 192 aa13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 IGFBP3P17936 291 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 PAQR4Q8N4S7 273 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-221ENST00000636012 SYNJ2BPP57105 145 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 PRDM13Q9H4Q3 707 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 SMIM2Q9BVW6 85 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 Q8TAT8 98 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 A0A0A6YYD4 124 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 ZNF138P52744 262 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 RUSC1-AS1Q66K80 236 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 RASL11AQ6T310 242 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 PRIMA1Q86XR5 153 aa13.09□□□□□ -0.31
CACNA1A-221ENST00000636012 SAA4P35542 130 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 NBL1P41271 181 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 SLC25A48Q6ZT89 311 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 TMEM256Q8N2U0 113 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 Q9HAA7 133 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 IGLV3-12A0A075B6K2 115 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 ID3Q02535 119 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 A0A087WV48 116 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 LINC00587B1AMM8 73 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 TMEM238C9JI98 176 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 CHCHD1Q96BP2 118 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 A0A087X0K7 114 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 SHISA3A0PJX4 238 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 COL8A2P25067 703 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 MCRIP2Q9BUT9 160 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
CACNA1A-221ENST00000636012 A0A087WWC5 75 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 LINC00114Q6XXX2 140 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 RNF126Q9BV68 326 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 MSRB2Q9Y3D2 182 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 IL18BPO95998 194 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 USMG5Q96IX5 58 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 SCRT2Q9NQ03 307 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 PLXNB1O43157 2135 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 FOXG1P55316 489 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 C14orf178Q8N769 122 aaPredicted RBP13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 NBASA2RRP1 2371 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 MORN5Q5VZ52 161 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 RNF183Q96D59 192 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 IGKV1-9A0A0C4DH69 117 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 GGNQ86UU5 652 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 OSTCQ9NRP0 149 aa13.07□□□□□ -0.32
CACNA1A-221ENST00000636012 SEC61GP60059 68 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 RASL10AQ92737 203 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 TCF15Q12870 199 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 PLXNA4Q9HCM2 1894 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 PLXNB3Q9ULL4 1909 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 KIAA1549Q9HCM3 1950 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 SH2D1AO60880 128 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 TRACP01848 142 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 PMVKQ15126 192 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 LYZL1Q6UWQ5 148 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 SOCS3O14543 225 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 C5orf64Q2M2E5 130 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 LYPD2Q6UXB3 125 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 TSKUQ8WUA8 353 aa13.06□□□□□ -0.32
CACNA1A-221ENST00000636012 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 SRSF8Q9BRL6 282 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 M0R1W7 72 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 KLF5Q13887 457 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 NCOA6Q14686 2063 aaPredicted RBP13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 TNFSF13O75888 250 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 SRSF3P84103 164 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 PSG3Q16557 428 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 CD177Q8N6Q3 437 aa13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 TNRC6BQ9UPQ9 1833 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-221ENST00000636012 TRAV3A0A0B4J244 114 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms