RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SMIM17P0DL12 118 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 APELAP0DMC3 54 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 WT1P19544 449 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 LOXP28300 417 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 IFI27L1Q96BM0 104 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 TMEM133Q9H2Q1 129 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 TECTAO75443 2155 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 A0A1W2PPM0 123 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 TMEM189A5PLL7 270 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 Q71RC1 249 aaPredicted RBP11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 PIFOQ8TCI5 191 aa11.71□□□□□ -0.53
CACNA1A-220ENST00000635988 IGKV1-17P01599 117 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 THBDP07204 575 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 PLGLAQ15195 96 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 LYZL1Q6UWQ5 148 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 NDUFS8O00217 210 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 KLK10O43240 276 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 RIPPLY3P57055 190 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 FAM27E3Q08E93 113 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 PDE6HQ13956 83 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 AAMDCQ9H7C9 122 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 KAAG1Q9UBP8 84 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
CACNA1A-220ENST00000635988 ADIPOQQ15848 244 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 CCL17Q92583 94 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 HILPDAQ9Y5L2 63 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 INSIG2Q9Y5U4 225 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 NBEAQ8NFP9 2946 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 FABP2P12104 132 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 CNTFRP26992 372 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 PAX8Q06710 450 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 C17orf77Q96MU5 243 aa11.69□□□□□ -0.54
CACNA1A-220ENST00000635988 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 SRSF6Q13247 344 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 MRPL51Q4U2R6 128 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 ABHD17AQ96GS6 310 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 CTSZQ9UBR2 303 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 TMEM213A2RRL7 107 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 NMUP48645 174 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 C22orf34Q6ZV56 151 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 RNF125Q96EQ8 232 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 RNF5Q99942 180 aa11.68□□□□□ -0.54
CACNA1A-220ENST00000635988 IGHV1-3A0A0C4DH29 117 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 CEACAM4O75871 244 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 CKS2P33552 79 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 COX8CQ7Z4L0 72 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 ARFGEF3Q5TH69 2177 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 VSTM5A8MXK1 200 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 MRPS12O15235 138 aaKnown RBP11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 NDUFS7O75251 213 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 LINC01559Q495D7 138 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 ZNF491Q8N8L2 437 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 C8orf49Q96NF6 230 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 HIGD1BQ9P298 99 aa11.67□□□□□ -0.54
CACNA1A-220ENST00000635988 SH2D1AO60880 128 aa11.66□□□□□ -0.54
CACNA1A-220ENST00000635988 IGLV1-47P01700 117 aa11.66□□□□□ -0.54
CACNA1A-220ENST00000635988 PCP2Q8IVA1 136 aa11.66□□□□□ -0.54
CACNA1A-220ENST00000635988 FBXL15Q9H469 300 aa11.66□□□□□ -0.54
CACNA1A-220ENST00000635988 K7EIM0 57 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 DEFB109BQ30KR1 87 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 SAMD5Q5TGI4 173 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 ASCL2Q99929 193 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 NAA38Q9BRA0 125 aaKnown RBP11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 RAB1BQ9H0U4 201 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 ICE1Q9Y2F5 2266 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 M0R3E3 92 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 IL4P05112 153 aa11.65□□□□□ -0.54
CACNA1A-220ENST00000635988 PLXNB1O43157 2135 aa11.65□□□□□ -0.55
CACNA1A-220ENST00000635988 TMSB15BA0A087X1C1 80 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 WI2-2373I1.2A0A1W2PRP0 233 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 BUB1B-PAK6H3BSN5 160 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 NPYP01303 97 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 FCGR2BP31994 310 aaPredicted RBP11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 BMI1P35226 326 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 MAP1LC3AQ9H492 121 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 PLCE1Q9P212 2302 aa11.64□□□□□ -0.55
CACNA1A-220ENST00000635988 DMDP11532 3685 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 LINC01546A6NGU7 62 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 CNIH1O95406 144 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 TWIST1Q15672 202 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 WFDC8Q8IUA0 241 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 PRSS33Q8NF86 280 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 IGFL3Q6UXB1 125 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 RPEQ96AT9 228 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 DKK2Q9UBU2 259 aa11.63□□□□□ -0.55
CACNA1A-220ENST00000635988 FXYD7P58549 80 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 SRSF2Q01130 221 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 ZMAT4Q9H898 229 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 NXT2Q9NPJ8 142 aaKnown RBP11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 GCSHP23434 173 aa11.62□□□□□ -0.55
CACNA1A-220ENST00000635988 TCTAP57738 103 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms