RNA–Protein interactions for RNA: ENST00000629089.1

SPTAN1-217, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 1,546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-217ENST00000629089 IZUMO1RA6ND01 250 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 TSPAN4O14817 238 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 MEOX2P50222 304 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 RAB14P61106 215 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 GUCA2BQ16661 112 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 GUK1Q16774 197 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 C17orf77Q96MU5 243 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 TMEM167BQ9NRX6 74 aa13.29□□□□□ -0.28
SPTAN1-217ENST00000629089 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 TRAV1-1A0A0B4J248 108 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 PSMB3P49720 205 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 C16orf92Q96LL3 132 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 SPAG8Q99932 426 aaPredicted RBP13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 TRRAPQ9Y4A5 3859 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 ANK2Q01484 3957 aa13.27□□□□□ -0.29
SPTAN1-217ENST00000629089 PDE6HQ13956 83 aa13.26□□□□□ -0.29
SPTAN1-217ENST00000629089 OXLD1Q5BKU9 147 aa13.26□□□□□ -0.29
SPTAN1-217ENST00000629089 VWFP04275 2813 aa13.26□□□□□ -0.29
SPTAN1-217ENST00000629089 OR4C46A6NHA9 309 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 NMBP08949 121 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 CCL20P78556 96 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 SAMD13Q5VXD3 122 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 DCANP1Q8TF63 244 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 SLC50A1Q9BRV3 221 aa13.25□□□□□ -0.29
SPTAN1-217ENST00000629089 TRAV2A0A0B4J234 112 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 K7EQG2 157 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 SLC17A3O00476 420 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 WIPF1O43516 503 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 UBE2G2P60604 165 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 RANP62826 216 aaKnown RBP13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 PSG9Q00887 426 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 SUN5Q8TC36 379 aa13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 ZNF331Q9NQX6 463 aaPredicted RBP13.24□□□□□ -0.29
SPTAN1-217ENST00000629089 RGS13O14921 159 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 ZNF253O75346 499 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 NDUFB4O95168 129 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 ID1P41134 155 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 PPT1P50897 306 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 IGFL4Q6B9Z1 124 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 LYPD6BQ8NI32 183 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 GNG13Q9P2W3 67 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 ISLRO14498 428 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 SOCS3O14543 225 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 Q9H3A6 140 aa13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 ZNF256Q9Y2P7 627 aaPredicted RBP13.23□□□□□ -0.29
SPTAN1-217ENST00000629089 IFNA1P01562 189 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 CLLU1Q5K131 121 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 LYPD1Q8N2G4 141 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 EXOC3-AS1Q8N2X6 119 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 FAM24BQ8N5W8 94 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 LINC00052Q96N35 136 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 MANBALQ9NQG1 85 aa13.22□□□□□ -0.29
SPTAN1-217ENST00000629089 TRAV8-2A0A0B4J237 113 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 A0A1W2PRE2 83 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 G3V4G9 280 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 PAGE4O60829 102 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 ZNF688P0C7X2 276 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 ICAM4Q14773 271 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 CST9LP1Q5W188 147 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 RNF182Q8N6D2 247 aa13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 YTHDF2Q9Y5A9 579 aaKnown RBP13.21□□□□□ -0.29
SPTAN1-217ENST00000629089 PGPA6NDG6 321 aa13.2□□□□□ -0.3
SPTAN1-217ENST00000629089 FAM74A7A6NL05 159 aa13.2□□□□□ -0.3
SPTAN1-217ENST00000629089 HLA-DMBP28068 263 aa13.2□□□□□ -0.3
SPTAN1-217ENST00000629089 PSMG4Q5JS54 123 aa13.2□□□□□ -0.3
SPTAN1-217ENST00000629089 CLEC5AQ9NY25 188 aa13.2□□□□□ -0.3
SPTAN1-217ENST00000629089 SUMO1P63165 101 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 HAGHQ16775 308 aa13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 BEAN1Q3B7T3 259 aa13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 OTORQ9NRC9 128 aa13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 ZMAT5Q9UDW3 170 aaKnown RBP13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 ARL2-SNX15V9GYD0 113 aa13.19□□□□□ -0.3
SPTAN1-217ENST00000629089 PSG3Q16557 428 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 SAMD5Q5TGI4 173 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 GTSCR1Q86UQ5 136 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 ZNF738Q8NE65 137 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 C20orf173Q96LM9 149 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 NKX6-2Q9C056 277 aaPredicted RBP13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 PRELID1Q9Y255 219 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 GGTLC3B5MD39 225 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 M0R3E3 92 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 CD7P09564 240 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 CSN1S1P47710 185 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 DEFB131AP59861 70 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 CD81P60033 236 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 PMS2P11Q13670 270 aa13.18□□□□□ -0.3
SPTAN1-217ENST00000629089 C11orf94C9JXX5 98 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 SLC25A5P05141 298 aaKnown RBP13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 BCL2P10415 239 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 ATP5G3P48201 142 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 CMC4P56277 68 aaPredicted RBP13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 EGFEM1PQ0D2K5 195 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 MAP6D1Q9H9H5 199 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 RPH3ALQ9UNE2 315 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 NOTCH3Q9UM47 2321 aa13.17□□□□□ -0.3
SPTAN1-217ENST00000629089 RBFOX3A6NFN3 312 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms