RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 ACTL10Q5JWF8 245 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 UBE2UQ5VVX9 321 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 GLT8D1Q68CQ7 371 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 LAMTOR1Q6IAA8 161 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 LAIR2Q6ISS4 152 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 TOMM20LQ6UXN7 152 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 CEND1Q8N111 149 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 C1orf158Q8N1D5 194 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 CBR4Q8N4T8 237 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 GDPD1Q8N9F7 314 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 OR4A4PQ8NGN8 299 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 OR1S2Q8NGQ3 325 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 LRRC20Q8TCA0 184 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 TRUB1Q8WWH5 349 aaKnown RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 DGCR14Q96DF8 476 aaKnown RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 FAM210BQ96KR6 192 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 KIR2DL4Q99706 377 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 ATP5SQ99766 215 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 UQCC2Q9BRT2 126 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MAP1LC3CQ9BXW4 147 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 C6orf62Q9GZU0 229 aaPredicted RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 Q9H3A6 140 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 C12orf4Q9NQ89 552 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 PLEKHJ1Q9NW61 149 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 BET1LQ9NYM9 111 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MRPL36Q9P0J6 103 aaKnown RBP1.96□□□□□ -2.1
CDKL5-208ENST00000624953 XCL2Q9UBD3 114 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 MUC2Q02817 5179 aa1.96□□□□□ -2.1
CDKL5-208ENST00000624953 TRAV2A0A0B4J234 112 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 TEX50A0A1B0GTY4 177 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 SMCO3A2RU48 225 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 ZFP92A6NM28 416 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 H3BMM0 161 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 K7EN84 100 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 UPK2O00526 184 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 HLA-DQB1P01920 261 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 SPART-AS1P0CW21 52 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 RD3LP0DJH9 198 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 PTHLHP12272 177 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 DEFA4P12838 97 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 NFYAP23511 347 aaPredicted RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 HNRNPA3P51991 378 aaKnown RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 CLDN12P56749 244 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 LINC00315P59091 139 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 UBE2G2P60604 165 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 OXA1LQ15070 435 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 PSG3Q16557 428 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 POU2AF1Q16633 256 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 C2orf83Q53S99 150 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 C1orf146Q5VVC0 180 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 GPR107Q5VW38 600 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 MEDAGQ5VYS4 303 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 C22orf42Q6IC83 251 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 SSX7Q7RTT5 188 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 BOD1L2Q8IYS8 172 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 UBAC2Q8NBM4 344 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 OR10J5Q8NHC4 309 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 BAALCQ8WXS3 180 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 ADTRPQ96IZ2 230 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 CMSS1Q9BQ75 279 aaKnown RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 NXF2Q9GZY0 626 aaKnown RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 RNF167Q9H6Y7 350 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 BATF3Q9NR55 127 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 NDUFA4L2Q9NRX3 87 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 BABAM2Q9NXR7 383 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 ZNF586Q9NXT0 402 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 C21orf62Q9NYP8 219 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 TAS2R8Q9NYW2 309 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 YTHDF2Q9Y5A9 579 aaKnown RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 ORC6Q9Y5N6 252 aa1.95□□□□□ -2.1
CDKL5-208ENST00000624953 F11RQ9Y624 299 aaKnown RBP1.95□□□□□ -2.1
CDKL5-208ENST00000624953 IGLV8-61A0A075B6I0 122 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 A0A087WTM6 91 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TRAV14DV4A0A0A6YYC5 116 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 A0A1B0GW15 77 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 FAM231BA6NCW3 169 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CREBL2O60519 120 aaPredicted RBP1.94□□□□□ -2.1
CDKL5-208ENST00000624953 ADAP1O75689 374 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 SERF1AO75920 110 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CDK1P06493 297 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 UBBP0CG47 229 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 OR13C7P0DN81 318 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CRHBPP24387 322 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CRYBB3P26998 211 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 RANBP1P43487 201 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 SERPINB10P48595 397 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CMC4P56277 68 aaPredicted RBP1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TAS2R43P59537 309 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TPBGQ13641 420 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 ESRGQ1W209 222 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 Q56UQ5 140 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 PSMG4Q5JS54 123 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TMEM69Q5SWH9 247 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 TMEM91Q6ZNR0 172 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 Q6ZS49 121 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 CMTM1Q8IZ96 169 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 PACRGLQ8N7B6 248 aa1.94□□□□□ -2.1
CDKL5-208ENST00000624953 C15orf53Q8NAA6 179 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms