RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 BLMP54132 1417 aaPredicted RBP0.87□□□□□ -2.27
CDKL5-207ENST00000624700 FREM2Q5SZK8 3169 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 CNTRLQ7Z7A1 2325 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 HIVEP1P15822 2718 aa0.87□□□□□ -2.27
CDKL5-207ENST00000624700 ZCCHC6Q5VYS8 1495 aaKnown RBP0.86□□□□□ -2.27
CDKL5-207ENST00000624700 MRC2Q9UBG0 1479 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 NBPF19A0A087WUL8 3843 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 TRBV19A0A075B6N1 114 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 E2F6O75461 281 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 DHFRP00374 187 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 CNBPP62633 177 aaKnown RBP0.86□□□□□ -2.27
CDKL5-207ENST00000624700 KRR1Q13601 381 aaKnown RBP0.86□□□□□ -2.27
CDKL5-207ENST00000624700 DEFB113Q30KQ7 82 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 BCL2L15Q5TBC7 163 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 C2orf82Q6UX34 121 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 BORCS5Q969J3 196 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 SLAMF6Q96DU3 332 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 GPER1Q99527 375 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 CDC42SE1Q9NRR8 79 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 WDFY3Q8IZQ1 3526 aa0.86□□□□□ -2.27
CDKL5-207ENST00000624700 SNRNP200O75643 2136 aaKnown RBP0.85□□□□□ -2.27
CDKL5-207ENST00000624700 TRAV4A0A0B4J268 109 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 PRAP1Q96NZ9 151 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 SIGMAR1Q99720 223 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 PRADC1Q9BSG0 188 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 UBAP1Q9NZ09 502 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 CAMSAP1Q5T5Y3 1602 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 SPENQ96T58 3664 aaKnown RBP0.85□□□□□ -2.27
CDKL5-207ENST00000624700 MYO15AQ9UKN7 3530 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 CASP8AP2Q9UKL3 1982 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 SCN8AQ9UQD0 1980 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
CDKL5-207ENST00000624700 CSMD2Q7Z408 3487 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 CACNA1HO95180 2353 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 A8MWV9 139 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 GGCTO75223 188 aaKnown RBP0.84□□□□□ -2.27
CDKL5-207ENST00000624700 GADD45GO95257 159 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 RNASE4P34096 147 aaKnown RBP0.84□□□□□ -2.27
CDKL5-207ENST00000624700 PIGPP57054 158 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 MYL6P60660 151 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 DYNLT1P63172 113 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 MYL5Q02045 173 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 C22orf39Q6P5X5 142 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 OR11H6Q8NGC7 330 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 PATE1Q8WXA2 126 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 IMUPQ9GZP8 106 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 RNASE7Q9H1E1 156 aaKnown RBP0.84□□□□□ -2.27
CDKL5-207ENST00000624700 HEATR1Q9H583 2144 aaKnown RBP0.84□□□□□ -2.27
CDKL5-207ENST00000624700 ARL2BPQ9Y2Y0 163 aa0.84□□□□□ -2.27
CDKL5-207ENST00000624700 LRP6O75581 1613 aa0.84□□□□□ -2.28
CDKL5-207ENST00000624700 NUP98P52948 1817 aa0.84□□□□□ -2.28
CDKL5-207ENST00000624700 SIP14410 1827 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 TRBV6-4A0A1B0GX49 114 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 TIMM17BO60830 172 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 IFNA7P01567 189 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 FADDQ13158 208 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 RRN3P1Q2M238 152 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 CLECL1Q8IZS7 167 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 ST6GALNAC3Q8NDV1 305 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 CANT1Q8WVQ1 401 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 NCAPD3P42695 1498 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 MYO18AQ92614 2054 aaKnown RBP0.83□□□□□ -2.28
CDKL5-207ENST00000624700 NWD1Q149M9 1564 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 NRKQ7Z2Y5 1582 aa0.83□□□□□ -2.28
CDKL5-207ENST00000624700 CHD3Q12873 2000 aaKnown RBP0.82□□□□□ -2.28
CDKL5-207ENST00000624700 ZFYVE9O95405 1425 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 NUP210LQ5VU65 1888 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 CFAP43Q8NDM7 1665 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 TCRBV4S1A1TA0A5B7 111 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 NDUFB3O43676 98 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 S100A6P06703 90 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 CTXN2P0C2S0 81 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 ZNF25P17030 456 aaPredicted RBP0.82□□□□□ -2.28
CDKL5-207ENST00000624700 PLPP5Q8NEB5 264 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 TP53RKQ96S44 253 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 ORMDL1Q9P0S3 153 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 TMEM14CQ9P0S9 112 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 EFCAB6Q5THR3 1501 aa0.82□□□□□ -2.28
CDKL5-207ENST00000624700 MYOM1P52179 1685 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 COL4A6Q14031 1691 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 FAT3Q8TDW7 4589 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 ZFC3H1O60293 1989 aaKnown RBP0.81□□□□□ -2.28
CDKL5-207ENST00000624700 MAP1AP78559 2803 aaPredicted RBP0.81□□□□□ -2.28
CDKL5-207ENST00000624700 SLIT1O75093 1534 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 A0A1W2PPM0 123 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 NCR3O14931 201 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 CCL16O15467 120 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 SRIP30626 198 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 ERVS71-1P61550 626 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 REEP5Q00765 189 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 PSG9Q00887 426 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 C4orf22Q6V702 233 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 LINC00322Q6ZN03 302 aaPredicted RBP0.81□□□□□ -2.28
CDKL5-207ENST00000624700 OR10X1Q8NGY0 326 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 TMEM70Q9BUB7 260 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 SVEP1Q4LDE5 3571 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 ATMQ13315 3056 aa0.81□□□□□ -2.28
CDKL5-207ENST00000624700 KIF21BO75037 1637 aa0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms