RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 C15orf32Q32M92 178 aa10.3□□□□□ -0.76
MSH6-215ENST00000622629 Q6AWC8 147 aa10.3□□□□□ -0.76
MSH6-215ENST00000622629 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
MSH6-215ENST00000622629 SELENOKQ9Y6D0 94 aa10.3□□□□□ -0.76
MSH6-215ENST00000622629 K7ENP7 123 aa10.3□□□□□ -0.76
MSH6-215ENST00000622629 FXYD7P58549 80 aa10.3□□□□□ -0.76
MSH6-215ENST00000622629 HIST1H1AQ02539 215 aaPredicted RBP10.3□□□□□ -0.76
MSH6-215ENST00000622629 TMEM238LA0A1B0GVL6 79 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 FABP5P3A8MUU1 101 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 TOMM40O96008 361 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 IGKV3-20P01619 116 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 C22orf34Q6ZV56 151 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 TMEM219Q86XT9 240 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 ATG2AQ2TAZ0 1938 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 FRMD6-AS1P0C7T7 363 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 RCHY1Q96PM5 261 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 E7EUB6 86 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 K7ERU9 68 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 COA6Q5JTJ3 125 aaKnown RBP10.29□□□□□ -0.76
MSH6-215ENST00000622629 KIAA1549Q9HCM3 1950 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 hDV102S1A0JD36 115 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 NCR2O95944 276 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 GRNP28799 593 aaKnown RBP10.29□□□□□ -0.76
MSH6-215ENST00000622629 PDLIM4P50479 330 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 FXYD5Q96DB9 178 aa10.29□□□□□ -0.76
MSH6-215ENST00000622629 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 CEACAM4O75871 244 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 LINC00311Q8N616 119 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 ARMS2P0C7Q2 107 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 LYZL1Q6UWQ5 148 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 C1orf229Q6ZS94 237 aaPredicted RBP10.28□□□□□ -0.76
MSH6-215ENST00000622629 Q86TA4 180 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 RITA1Q96K30 269 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 RNF5Q99942 180 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 NCKAP5O14513 1909 aa10.28□□□□□ -0.76
MSH6-215ENST00000622629 A1L4Q6 167 aa10.27□□□□□ -0.76
MSH6-215ENST00000622629 ZNF502Q8TBZ5 544 aa10.27□□□□□ -0.76
MSH6-215ENST00000622629 TMEM160Q9NX00 188 aa10.27□□□□□ -0.76
MSH6-215ENST00000622629 MRPL27Q9P0M9 148 aaKnown RBP10.27□□□□□ -0.76
MSH6-215ENST00000622629 MYO9AB2RTY4 2548 aa10.27□□□□□ -0.76
MSH6-215ENST00000622629 CFAP54Q96N23 3096 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 IGLC7A0M8Q6 106 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 D6R8Y8 96 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 EVI2AP22794 236 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
MSH6-215ENST00000622629 GUSBP1Q15486 140 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 GLMPQ8WWB7 406 aa10.27□□□□□ -0.77
MSH6-215ENST00000622629 CACNG7P62955 275 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 CHCHD1Q96BP2 118 aaKnown RBP10.26□□□□□ -0.77
MSH6-215ENST00000622629 EXPH5Q8NEV8 1989 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 TRAV8-6A0A0B4J262 113 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 PRTN3P24158 256 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 SHANK2-AS3Q9BTD1 123 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 TMEM208Q9BTX3 173 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 IGLC1P0CG04 106 aa10.26□□□□□ -0.77
MSH6-215ENST00000622629 ZFYVE26Q68DK2 2539 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 PSG3Q16557 428 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 TMEM95Q3KNT9 176 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 PATE2Q6UY27 113 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
MSH6-215ENST00000622629 SHISA9B4DS77 424 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 TDGF1P3P51864 188 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 TDRG1Q3Y452 100 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 FAM74A4Q5TZK3 123 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 AMN1Q8IY45 258 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 C20orf144Q9BQM9 153 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 CGB3P0DN86 165 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 CGB7P0DN87 165 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 ID1P41134 155 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 FBLN7Q53RD9 439 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 FOXC2Q99958 501 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 KAAG1Q9UBP8 84 aa10.25□□□□□ -0.77
MSH6-215ENST00000622629 TRAV40A0A0B4J280 105 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 C22orf46C9J442 243 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 J3QR89 54 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 NDPQ00604 133 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 CR1LQ2VPA4 569 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 BRD3OSQ6XYD6 125 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 SMKR1H3BMG3 65 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 SCGB1C2P0DMR2 95 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 EIF4EBP1Q13541 118 aaPredicted RBP10.24□□□□□ -0.77
MSH6-215ENST00000622629 ZNF562Q6V9R5 426 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 C17orf77Q96MU5 243 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 ALKBH7Q9BT30 221 aaPredicted RBP10.24□□□□□ -0.77
MSH6-215ENST00000622629 WNK1Q9H4A3 2382 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 NDUFB8O95169 186 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 FAM231DQ6ZW35 169 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 YPEL4Q96NS1 127 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 CCL19Q99731 98 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 ARHGAP32A7KAX9 2087 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 SH2D1AO60880 128 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 HBDP02042 147 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 FAM106AQ4KMX7 169 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 THAP8Q8NA92 274 aa10.24□□□□□ -0.77
MSH6-215ENST00000622629 DNAH14Q0VDD8 3507 aa10.23□□□□□ -0.77
MSH6-215ENST00000622629 TRBV19A0A075B6N1 114 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms