RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 TXN2Q99757 166 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 A0A1W2PRD5 423 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 A0A1W2PRF3 423 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 A0A1W2PRM7 423 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 NCBP2LA6PVI3 153 aaKnown RBP7.38□□□□□ -1.23
PDPN-212ENST00000621990 M0R143 59 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 UBE2E1P51965 193 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 EFNA4P52798 201 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 SSTP61278 116 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 FAM162BQ5T6X4 162 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 BCL6BQ8N143 479 aaPredicted RBP7.38□□□□□ -1.23
PDPN-212ENST00000621990 Q8N9W7 124 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 PSG8Q9UQ74 426 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 PAM16Q9Y3D7 125 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 NBASA2RRP1 2371 aa7.38□□□□□ -1.23
PDPN-212ENST00000621990 FAM181BA6NEQ2 426 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 NDUFB8O95169 186 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 SFTPCP11686 197 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 TMEM11P17152 192 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 HIVEP3Q5T1R4 2406 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 LOC102724200A0A096LPH7 203 aaPredicted RBP7.37□□□□□ -1.23
PDPN-212ENST00000621990 SH2D7A6NKC9 451 aaPredicted RBP7.37□□□□□ -1.23
PDPN-212ENST00000621990 HSBP1O75506 76 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 CTSGP08311 255 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 FAM106CPP0CH98 169 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 CRIP1P50238 77 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 NUTF2P61970 127 aaKnown RBP7.37□□□□□ -1.23
PDPN-212ENST00000621990 BORCS7Q96B45 105 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 CHCHD1Q96BP2 118 aaKnown RBP7.37□□□□□ -1.23
PDPN-212ENST00000621990 S4R3C0 116 aa7.37□□□□□ -1.23
PDPN-212ENST00000621990 SPTBN4Q9H254 2564 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 M0QZK8 103 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 NDUFS7O75251 213 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 PSG9Q00887 426 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 Q56UQ5 140 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 FAM120AOSQ5T036 256 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 Q6AWC8 147 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 PRORYQ9H606 182 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 C1RLQ9NZP8 487 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 A0A1B0GW15 77 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 C2orf70A6NJV1 201 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 SCGB2A1O75556 95 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 TOX4O94842 621 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 NTF3P20783 257 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 LMO4P61968 165 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 CYB5R2Q6BCY4 276 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 AAMDCQ9H7C9 122 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 FBLL1A6NHQ2 334 aaKnown RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 M0R2Z0 102 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 RPL7P18124 248 aaKnown RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 EBLN2Q6P2I7 272 aa7.36□□□□□ -1.23
PDPN-212ENST00000621990 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 FAM110DQ8TAY7 271 aaPredicted RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 ITLN2Q8WWU7 325 aaPredicted RBP7.36□□□□□ -1.23
PDPN-212ENST00000621990 A0A1B0GUT8 65 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 OR2T8A6NH00 312 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 M0R3E3 92 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 PMCHL1Q16048 86 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 CHEK1O14757 476 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 RNF224P0DH78 156 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
PDPN-212ENST00000621990 ZNF502Q8TBZ5 544 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 UBTD1Q9HAC8 227 aa7.35□□□□□ -1.23
PDPN-212ENST00000621990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.34□□□□□ -1.23
PDPN-212ENST00000621990 LY6DQ14210 128 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 LPAR2Q9HBW0 351 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 SMAD5-AS1Q9Y6J3 95 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 IGHV1-24A0A0C4DH33 117 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 IGHG4P01861 327 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 IGLC3P0DOY3 106 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 S100A7P31151 101 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 SAA4P35542 130 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 CSN1S1P47710 185 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 RIGQ13278 110 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 ZNF493Q6ZR52 646 aa7.34□□□□□ -1.23
PDPN-212ENST00000621990 VPS13CQ709C8 3753 aa7.34□□□□□ -1.24
PDPN-212ENST00000621990 C20orf202A1L168 122 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 IGHV3-23P01764 117 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 ARMS2P0C7Q2 107 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 C8orf49Q96NF6 230 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 BPESC1Q9GZL8 116 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 UQCR10Q9UDW1 63 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 CHD8Q9HCK8 2581 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 SPTBN1Q01082 2364 aaKnown RBP7.33□□□□□ -1.24
PDPN-212ENST00000621990 A0A087X0K7 114 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 LINC00614P0C842 121 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 CT45A10P0DMU9 189 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 ANKRD39Q53RE8 183 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 SAPCD1Q5SSQ6 148 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 LCN12Q6JVE5 192 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 COL6A6A6NMZ7 2263 aa7.33□□□□□ -1.24
PDPN-212ENST00000621990 CENPVL3A0A0U1RRI6 287 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 ATP6V0E1O15342 81 aa7.32□□□□□ -1.24
PDPN-212ENST00000621990 OR5AL1P0C617 328 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms