RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 STPG4Q8N801 248 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 LYZL1Q6UWQ5 148 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 TREML4Q6UXN2 200 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 LTBP1Q14766 1721 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 PAX8Q06710 450 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 RCHY1Q96PM5 261 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 DTX4Q9Y2E6 619 aa5.91□□□□□ -1.46
COLCA1-205ENST00000620864 LY6G6CO95867 125 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 BVES-AS1Q5T3Y7 98 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 TMEM75Q8N9X5 138 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 NPIPB5A8MRT5 1133 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 IGHV3-11P01762 117 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 IGLC2P0DOY2 106 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 IGLC3P0DOY3 106 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 DOCK6Q96HP0 2047 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 SAA2-SAA4A0A096LPE2 208 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 F6UB75 175 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 PRB2P02812 416 aaPredicted RBP5.9□□□□□ -1.46
COLCA1-205ENST00000620864 SAA2P0DJI9 122 aaPredicted RBP5.9□□□□□ -1.46
COLCA1-205ENST00000620864 PEBP1P30086 187 aaKnown RBP5.9□□□□□ -1.46
COLCA1-205ENST00000620864 CEACAM8P31997 349 aaPredicted RBP5.9□□□□□ -1.46
COLCA1-205ENST00000620864 PPP1R32Q7Z5V6 425 aa5.9□□□□□ -1.46
COLCA1-205ENST00000620864 MP68P56378 58 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 MORN2Q502X0 79 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 HAMPP81172 84 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 KLRD1Q13241 179 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 TMEM256Q8N2U0 113 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 Q8N8P6 123 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 GLMPQ8WWB7 406 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 TMEM243Q9BU79 118 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 A0A1W2PR77 199 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 FGF6P10767 208 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 IL15RAQ13261 267 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 PRR31Q5SQ13 230 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 TMEM14EPQ6UXP3 125 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 LSM4Q9Y4Z0 139 aaKnown RBP5.9□□□□□ -1.47
COLCA1-205ENST00000620864 ACACAQ13085 2346 aa5.9□□□□□ -1.47
COLCA1-205ENST00000620864 NCOR1O75376 2440 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 TRAV26-1A0A087WT03 109 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 PRB3Q04118 309 aaPredicted RBP5.89□□□□□ -1.47
COLCA1-205ENST00000620864 GPHA2Q96T91 129 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 TMEM133Q9H2Q1 129 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV3-64A0A075B6Q5 118 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 CENPVL1A0A0U1RR11 272 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 ETDBQ3ZM63 59 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 NACAE9PAV3 2078 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 ALPK2Q86TB3 2170 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 PRSS46E5RG02 174 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 IGHG2P01859 326 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 FAM27E3Q08E93 113 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 LEAP2Q969E1 77 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 SMIM10L1P0DMW3 83 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 LAIR2Q6ISS4 152 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 SMIM10Q96HG1 83 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 CARD19Q96LW7 228 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 LIME1Q9H400 295 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 CYTL1Q9NRR1 136 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 NPYP01303 97 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 PYYP10082 97 aa5.89□□□□□ -1.47
COLCA1-205ENST00000620864 SH2D1AO60880 128 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 COL4A1P02462 1669 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 IGHV3-48P01763 117 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 BSPH1Q075Z2 132 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 Q6ZVH6 145 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 LHFPL1Q86WI0 220 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 USMG5Q96IX5 58 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 SLC25A16P16260 332 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 WFDC1Q9HC57 220 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 TRBV6-6A0A0A6YYG2 114 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 TRAV13-1A0A0B4J241 112 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 LCNL1Q6ZST4 164 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 ARFGEF3Q5TH69 2177 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 TMEM52Q8NDY8 209 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 MYO7BQ6PIF6 2116 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 CRLF1O75462 422 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 LCN12Q6JVE5 192 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 Q6ZS49 121 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 FAM231DQ6ZW35 169 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 CHKB-CPT1BH3BT56 60 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 TAX1BP3O14907 124 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 SUPT4H1P63272 117 aaKnown RBP5.88□□□□□ -1.47
COLCA1-205ENST00000620864 MCRIP2Q9BUT9 160 aaKnown RBP5.88□□□□□ -1.47
COLCA1-205ENST00000620864 S4R3C0 116 aa5.88□□□□□ -1.47
COLCA1-205ENST00000620864 FAM223BA6NKX1 122 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 I3L3M4 83 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 HLA-DRB4P13762 266 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 FAM223AQ8IWN6 122 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 NKAPP1Q8N9T2 125 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 ZNF625Q96I27 306 aaPredicted RBP5.87□□□□□ -1.47
COLCA1-205ENST00000620864 CLUHP3Q96NS8 147 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 HLA-DRB4X5D2U9 266 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 PSME4Q14997 1843 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 MINOS1Q5TGZ0 78 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 LINC00114Q6XXX2 140 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 RNASE6Q93091 150 aaKnown RBP5.87□□□□□ -1.47
COLCA1-205ENST00000620864 MINOS1-NBL1R4GNA1 71 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 SHISA9B4DS77 424 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 CRYBA2P53672 197 aa5.87□□□□□ -1.47
COLCA1-205ENST00000620864 IGFBPL1Q8WX77 278 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms