RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 USP54Q70EL1 1684 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 NUP210Q8TEM1 1887 aaPredicted RBP0.46□□□□□ -2.34
U6.42-201ENST00000618440 TRAV5A0A0B4J249 113 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 RIIAD1A6NNX1 92 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 TMEM238C9JI98 176 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 M0R233 179 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 NCR3O14931 201 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 KLF7O75840 302 aaPredicted RBP0.46□□□□□ -2.34
U6.42-201ENST00000618440 OR10J4P0C629 311 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 PRB4P10163 310 aaPredicted RBP0.46□□□□□ -2.34
U6.42-201ENST00000618440 RAB5CP51148 216 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 CDK6Q00534 326 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 POU6F1Q14863 301 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 AKR1C8PQ5T2L2 129 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 ARPINQ7Z6K5 226 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 TMED4Q7Z7H5 227 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 SMIM20Q8N5G0 67 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 NUP35Q8NFH5 326 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 OR13C6PQ8NH95 151 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 PLEKHB2Q96CS7 222 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 ZHX1-C8orf76Q96EF9 292 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 HYLS1Q96M11 299 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 PRRT1Q99946 306 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 RTL8AQ9BWD3 113 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 TMEM14CQ9P0S9 112 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 SSR3Q9UNL2 185 aa0.46□□□□□ -2.34
U6.42-201ENST00000618440 KIAA1549LQ6ZVL6 1849 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 TRAV27A0A087WT01 109 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 ODAMA1E959 279 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 COX7CP15954 63 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 OGNP20774 298 aaKnown RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 BASP1P80723 227 aaKnown RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 KLRD1Q13241 179 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 PHF5AQ7RTV0 110 aaKnown RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 SBSPONQ8IVN8 264 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 CHCHD1Q96BP2 118 aaKnown RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 HOPXQ9BPY8 73 aaPredicted RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 OR52A1Q9UKL2 312 aa0.45□□□□□ -2.34
U6.42-201ENST00000618440 ASCC3Q8N3C0 2202 aaKnown RBP0.45□□□□□ -2.34
U6.42-201ENST00000618440 IGLV3-32A0A0A0MS00 114 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 HIST1H2BKO60814 126 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 PIAS1O75925 651 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 IFNA14P01570 189 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 APOA2P02652 100 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 HIST1H2BJP06899 126 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 TMBIM6P55061 237 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 MSMO1Q15800 293 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 SNCBQ16143 134 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 C1orf140Q5VVS0 124 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 LINC00575Q6W349 94 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 MALSU1Q96EH3 234 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 CARD19Q96LW7 228 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 CACYBPQ9HB71 228 aaKnown RBP0.44□□□□□ -2.34
U6.42-201ENST00000618440 RNF11Q9Y3C5 154 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 TECPR2O15040 1411 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 YTHDC2Q9H6S0 1430 aaKnown RBP0.44□□□□□ -2.34
U6.42-201ENST00000618440 KIAA1107Q9UPP5 1409 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 ZGRF1Q86YA3 2104 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 ROCK1Q13464 1354 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 RTL9Q8NET4 1388 aa0.44□□□□□ -2.34
U6.42-201ENST00000618440 hDV103S1A0JD37 113 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 C9orf170A2RU37 121 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 F8W1H4 67 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 IDO1P14902 403 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 TAS2R41P59536 307 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 LTC4SQ16873 150 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 GKN2Q86XP6 184 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 PRR15Q8IV56 129 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 PSMF1Q92530 271 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 PBDC1Q9BVG4 233 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 OR2H1Q9GZK4 316 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 TNFSF18Q9UNG2 199 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 UFC1Q9Y3C8 167 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 TRAPPC8Q9Y2L5 1435 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 CTTNBP2Q8WZ74 1663 aa0.43□□□□□ -2.34
U6.42-201ENST00000618440 A0A1W2PPM0 123 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 OR2T8A6NH00 312 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 C5orf67F2Z3F1 127 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 H3BRM9 83 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 RER1O15258 196 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 IFNA4P05014 189 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 EIF3IQ13347 325 aaKnown RBP0.42□□□□□ -2.34
U6.42-201ENST00000618440 FKBP1CQ5VVH2 108 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 GLIPR1L1Q6UWM5 242 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 TEN1Q86WV5 123 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 OR10AG1Q8NH19 301 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 MAP1LC3BQ9GZQ8 125 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 BOLA2Q9H3K6 86 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 TAF9BQ9HBM6 251 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 PBRM1Q86U86 1689 aa0.42□□□□□ -2.34
U6.42-201ENST00000618440 TCOF1Q13428 1488 aaKnown RBP0.41□□□□□ -2.34
U6.42-201ENST00000618440 BCL9O00512 1426 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 JMJD7-PLA2G4BH0Y9G9 81 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 K7EIL1 84 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 PPYP01298 95 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 GLRXP35754 106 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 PPP1R2P41236 205 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 RPL35P42766 123 aaKnown RBP0.41□□□□□ -2.34
U6.42-201ENST00000618440 CRYBA4P53673 196 aa0.41□□□□□ -2.34
U6.42-201ENST00000618440 VBP1P61758 197 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms