RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 APCP25054 2843 aa13.43□□□□□ -0.26
PCDHGC3-205ENST00000617641 TRAV9-1A0A075B6T8 112 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 PLA2G2AP14555 144 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 RPL7P18124 248 aaKnown RBP13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 GFI1BQ5VTD9 330 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 LYPD1Q8N2G4 141 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 NUDT10Q8NFP7 164 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 NUDT11Q96G61 164 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 MLST8Q9BVC4 326 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 M0R3E3 92 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 PPIFP30405 207 aaKnown RBP13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 PCP4P48539 62 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 TPPP2P59282 170 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 FAM231DQ6ZW35 169 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 Q86TA4 180 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 TRAPPC1Q9Y5R8 145 aa13.42□□□□□ -0.26
PCDHGC3-205ENST00000617641 IGLV2-11P01706 119 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 FRMD6-AS1P0C7T7 363 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 PDE6HQ13956 83 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 Q71RC1 249 aaPredicted RBP13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 KRTAP1-3Q8IUG1 177 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 CBY1Q9Y3M2 126 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 SMAD5-AS1Q9Y6J3 95 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 DOPEY2Q9Y3R5 2298 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 CLPSL1A2RUU4 121 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 IFITM10A6NMD0 228 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 SPINK4O60575 86 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 PRNTQ86SH4 94 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 SVIPQ8NHG7 77 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 SMIM12Q96EX1 92 aa13.41□□□□□ -0.26
PCDHGC3-205ENST00000617641 SMIM27A0A1W2PRY6 76 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 CDX1P47902 265 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 SLC35B1P78383 322 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 LINC00322Q6ZN03 302 aaPredicted RBP13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 NBPF19A0A087WUL8 3843 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 IGHV3-66A0A0C4DH42 116 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 CBLN1P23435 193 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 PDZD11Q5EBL8 140 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 MBD6Q96DN6 1003 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 KLK15Q9H2R5 256 aa13.4□□□□□ -0.26
PCDHGC3-205ENST00000617641 J3QKU1 62 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 FSHBP01225 129 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 S100A8P05109 93 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 IER3P46695 156 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 ASCL2Q99929 193 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 AAMDCQ9H7C9 122 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGHV3OR16-13A0A075B7E8 117 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGHV3-74A0A0B4J1X5 117 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 DIRC3C9JPN6 131 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 TRBV12-3P01733 135 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 TMEM95Q3KNT9 176 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 LCNL1Q6ZST4 164 aa13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 CIARTQ8N365 385 aaPredicted RBP13.39□□□□□ -0.27
PCDHGC3-205ENST00000617641 BUB3O43684 328 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 PF4V1P10720 104 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 S100A7P31151 101 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 TMEM75Q8N9X5 138 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGHV3-49A0A0A0MS15 119 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 ARL3P36405 182 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 PSG9Q00887 426 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 TMEM183AQ8IXX5 376 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 GRAMD2BQ96HH9 432 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 ATP6V0BQ99437 205 aa13.38□□□□□ -0.27
PCDHGC3-205ENST00000617641 XKRY2A2RUG3 117 aa13.37□□□□□ -0.27
PCDHGC3-205ENST00000617641 H3BUA1 57 aa13.37□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGHV3-11P01762 117 aa13.37□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGFL4Q6B9Z1 124 aa13.37□□□□□ -0.27
PCDHGC3-205ENST00000617641 GPR61Q9BZJ8 451 aa13.37□□□□□ -0.27
PCDHGC3-205ENST00000617641 TRBV6-1A0A0K0K1D8 114 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 K7EQM0 130 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 BRI3O95415 125 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 PSG3Q16557 428 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 PSG8Q9UQ74 426 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 A0A1B0GV90 55 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 C19orf71A6NCJ1 209 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 MRPL54Q6P161 138 aaKnown RBP13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 PRSS57Q6UWY2 283 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 USMG5Q96IX5 58 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 PSMG3-AS1Q96PY0 264 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 METTL26Q96S19 204 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZNF492Q9P255 531 aa13.36□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGLV1-40P01703 118 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 HLA-DMBP28068 263 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 CFHR3Q02985 330 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 MRPL18Q9H0U6 180 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 PRRC2AP48634 2157 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 IZUMO1RA6ND01 250 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 ZNF785A8K8V0 405 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 SNURFLB1AK76 121 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 CSN1S1P47710 185 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 RAB9AP51151 201 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 PRSS22Q9GZN4 317 aa13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 RPP21Q9H633 154 aaKnown RBP13.35□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGKV2-40A0A087WW87 121 aaPredicted RBP13.34□□□□□ -0.27
PCDHGC3-205ENST00000617641 IGKV2D-40P01614 121 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms