RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 SNRPD3P62318 126 aaKnown RBP12.49□□□□□ -0.41
PTPRT-210ENST00000617474 NDPQ00604 133 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 K7EN84 100 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 Q86TA4 180 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 TMEM219Q86XT9 240 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 SPACA3Q8IXA5 215 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 FAM168AQ92567 244 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 MED12LQ86YW9 2145 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 TANC1Q9C0D5 1861 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 TOMM40O96008 361 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTPRT-210ENST00000617474 KIR3DS1Q14943 382 aa12.49□□□□□ -0.41
PTPRT-210ENST00000617474 WT1-ASQ06250 92 aa12.48□□□□□ -0.41
PTPRT-210ENST00000617474 CYSLTR1Q9Y271 337 aa12.48□□□□□ -0.41
PTPRT-210ENST00000617474 SRRM4A7MD48 611 aaKnown RBP12.48□□□□□ -0.41
PTPRT-210ENST00000617474 TPSG1Q9NRR2 321 aa12.48□□□□□ -0.41
PTPRT-210ENST00000617474 SLC50A1Q9BRV3 221 aa12.48□□□□□ -0.41
PTPRT-210ENST00000617474 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 RNASE1P07998 156 aaKnown RBP12.47□□□□□ -0.41
PTPRT-210ENST00000617474 UCNP55089 124 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 LCNL1Q6ZST4 164 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 DIAPH2-AS1Q14236 149 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 MRPS16Q9Y3D3 137 aaKnown RBP12.47□□□□□ -0.41
PTPRT-210ENST00000617474 NACAE9PAV3 2078 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 C17orf58Q2M2W7 97 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 VWC2Q2TAL6 325 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 OR9G4Q8NGQ1 327 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 PSG3Q16557 428 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 DUX5Q96PT3 197 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 GTSF1LQ9H1H1 148 aa12.47□□□□□ -0.41
PTPRT-210ENST00000617474 A0A0U1RRA0 63 aa12.46□□□□□ -0.41
PTPRT-210ENST00000617474 IGHG3P01860 377 aa12.46□□□□□ -0.41
PTPRT-210ENST00000617474 TMEM158Q8WZ71 300 aa12.46□□□□□ -0.41
PTPRT-210ENST00000617474 OR5A1Q8NGJ0 315 aa12.46□□□□□ -0.41
PTPRT-210ENST00000617474 A0A0G2JNJ9 132 aa12.46□□□□□ -0.42
PTPRT-210ENST00000617474 Q8NFD4 153 aa12.46□□□□□ -0.42
PTPRT-210ENST00000617474 TNFRSF14Q92956 283 aa12.46□□□□□ -0.42
PTPRT-210ENST00000617474 NDUFA4L2Q9NRX3 87 aa12.46□□□□□ -0.42
PTPRT-210ENST00000617474 Q9UFV3 132 aa12.46□□□□□ -0.42
PTPRT-210ENST00000617474 CHTOPQ9Y3Y2 248 aaKnown RBP12.46□□□□□ -0.42
PTPRT-210ENST00000617474 MBD3L4A6NDZ8 208 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 MBD3L3A6NE82 208 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 MBD3L5A6NJ08 208 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 CIRBPQ14011 172 aaKnown RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 MBD3L2Q8NHZ7 208 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 NEU4Q8WWR8 484 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 C7orf69Q9H7B7 122 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 TNFRSF18Q9Y5U5 241 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 SLC25A2Q9BXI2 301 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 BUB1B-PAK6H3BSN5 160 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 PAPPA-AS1Q5QFB9 102 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 TRAV8-2A0A0B4J237 113 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 HOXA3O43365 443 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 PPP1R17O96001 155 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 PRSS57Q6UWY2 283 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 CENPVQ7Z7K6 275 aaPredicted RBP12.45□□□□□ -0.42
PTPRT-210ENST00000617474 MTURNQ8N3F0 131 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 PIMREGQ9BSJ6 248 aa12.45□□□□□ -0.42
PTPRT-210ENST00000617474 TRAV2A0A0B4J234 112 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 FNDC10F2Z333 226 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 COL8A2P25067 703 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 C5orf64Q2M2E5 130 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 MYO9AB2RTY4 2548 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 ERCC8Q13216 396 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 PSMG4Q5JS54 123 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 HAX1O00165 279 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 CD5LO43866 347 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 GAGE13Q4V321 117 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 SIGMAR1Q99720 223 aa12.44□□□□□ -0.42
PTPRT-210ENST00000617474 KIF26AQ9ULI4 1882 aaPredicted RBP12.44□□□□□ -0.42
PTPRT-210ENST00000617474 TRAV21A0A0B4J279 112 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PYGO2Q9BRQ0 406 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 FAM231BA6NCW3 169 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 UBE2L6O14933 153 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
PTPRT-210ENST00000617474 LAGE3Q14657 143 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 TEX43Q6ZNM6 134 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 RAX2Q96IS3 184 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 IGHV4-39P01824 125 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PRR20EP86478 221 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PRR20CP86479 221 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PRR20DP86480 221 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PRR20BP86481 221 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 PRR20AP86496 221 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 C14orf178Q8N769 122 aaPredicted RBP12.43□□□□□ -0.42
PTPRT-210ENST00000617474 C11orf52Q96A22 123 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 CST9LQ9H4G1 147 aa12.43□□□□□ -0.42
PTPRT-210ENST00000617474 DENND4AQ7Z401 1863 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 IGHV1-24A0A0C4DH33 117 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 PAX8Q06710 450 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 TMEM249Q2WGJ8 235 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 C8orf49Q96NF6 230 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 TDGF1P13385 188 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 KLRB1Q12918 225 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 RRN3P1Q2M238 152 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 ORMDL2Q53FV1 153 aa12.42□□□□□ -0.42
PTPRT-210ENST00000617474 COA6Q5JTJ3 125 aaKnown RBP12.42□□□□□ -0.42
PTPRT-210ENST00000617474 VMO1Q7Z5L0 202 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms