RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 RPL34P49207 117 aaKnown RBP10.34□□□□□ -0.75
TCF4-248ENST00000616053 Q8TAT8 98 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 ARHGAP21Q5T5U3 1957 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 A0A1B0GX51 115 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
TCF4-248ENST00000616053 SPRR3Q9UBC9 169 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 CCL24O00175 119 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 DYNAPQ8N1N2 210 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 NDUFB8O95169 186 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 PEX11BO96011 259 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 C8orf49Q96NF6 230 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 CHCHD2Q9Y6H1 151 aaPredicted RBP10.33□□□□□ -0.76
TCF4-248ENST00000616053 D6R8Y8 96 aa10.33□□□□□ -0.76
TCF4-248ENST00000616053 MRPL23Q16540 153 aaKnown RBP10.33□□□□□ -0.76
TCF4-248ENST00000616053 I3L3M4 83 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 TFF1P04155 84 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 RHOHQ15669 191 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 XAF1Q6GPH4 301 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 KIAA0040Q15053 153 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 IGFL4Q6B9Z1 124 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 SMAD5-AS1Q9Y6J3 95 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 WISP1O95388 367 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 IGHV1-69P01742 117 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 HERV-K104P63124 156 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 C7orf33Q8WU49 177 aa10.32□□□□□ -0.76
TCF4-248ENST00000616053 C9JAW5 83 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 DDTP30046 118 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 ANKRD29Q8N6D5 301 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 TMEM14BQ9NUH8 114 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 CENPVL1A0A0U1RR11 272 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 A0A1B0GWJ7 208 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 HLA-DRB4P13762 266 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 IFITM3Q01628 133 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 APCDD1LQ8NCL9 501 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 ZC2HC1AQ96GY0 325 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 HLA-DRB4X5D2U9 266 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 BUB1B-PAK6H3BSN5 160 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 IGLV1-36A0A0B4J1U3 117 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
TCF4-248ENST00000616053 LRP6O75581 1613 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 PCNX1Q96RV3 2341 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 EML5Q05BV3 1969 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 SH2D1AO60880 128 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 CTSGP08311 255 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 C14orf177Q52M58 125 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 LYZL1Q6UWQ5 148 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 STPG4Q8N801 248 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 TUBGCP6Q96RT7 1819 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 SIGLEC9Q9Y336 463 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 WNK1Q9H4A3 2382 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 TRAV12-2A0A075B6T6 113 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 TCRBV5S1A1TA0A578 114 aa10.3□□□□□ -0.76
TCF4-248ENST00000616053 TRAV13-2A0A0B4J235 113 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 SH2D6Q7Z4S9 175 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 TSKUQ8WUA8 353 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 RNF5Q99942 180 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 RGPD8O14715 1765 aaPredicted RBP10.29□□□□□ -0.76
TCF4-248ENST00000616053 A0A1B0GW64 132 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 COL8A2P25067 703 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 HSD52Q0P140 79 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 C1QTNF5Q9BXJ0 243 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 RNF222A6NCQ9 220 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 AMELYQ99218 206 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 AGRNO00468 2067 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 EFNB3Q15768 340 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 C5orf66Q9H5L9 145 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 TMEM14DPA8MWL7 114 aa10.29□□□□□ -0.76
TCF4-248ENST00000616053 RGPD5Q99666 1765 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 CCL20P78556 96 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 IGLV10-54A0A075B6I4 117 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 IGHV1OR15-1A0A075B7D0 117 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 UBE2D3P61077 147 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 BOD1L2Q8IYS8 172 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 RPP25LQ8N5L8 163 aaKnown RBP10.28□□□□□ -0.76
TCF4-248ENST00000616053 NUP98P52948 1817 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 PAQR4Q8N4S7 273 aaPredicted RBP10.28□□□□□ -0.76
TCF4-248ENST00000616053 KLF2Q9Y5W3 355 aaPredicted RBP10.28□□□□□ -0.76
TCF4-248ENST00000616053 TRAV9-1A0A075B6T8 112 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 GBF1Q92538 1859 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 ATP5G1P05496 136 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 PCP4P48539 62 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 GYPEP15421 78 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 C10orf55Q5SWW7 151 aa10.28□□□□□ -0.76
TCF4-248ENST00000616053 MRPS18CQ9Y3D5 142 aaKnown RBP10.28□□□□□ -0.76
TCF4-248ENST00000616053 DANCRP0C864 163 aa10.27□□□□□ -0.76
TCF4-248ENST00000616053 CDKN1BP46527 198 aa10.27□□□□□ -0.76
TCF4-248ENST00000616053 MORN5Q5VZ52 161 aa10.27□□□□□ -0.76
TCF4-248ENST00000616053 LAMB1P07942 1786 aa10.27□□□□□ -0.76
TCF4-248ENST00000616053 ATAD5Q96QE3 1844 aa10.27□□□□□ -0.76
TCF4-248ENST00000616053 PQLC2LA1A4F0 135 aa10.27□□□□□ -0.77
TCF4-248ENST00000616053 CD59P13987 128 aa10.27□□□□□ -0.77
TCF4-248ENST00000616053 RGPD4Q7Z3J3 1758 aa10.27□□□□□ -0.77
TCF4-248ENST00000616053 RAMP3O60896 148 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 HOXB4P17483 251 aaPredicted RBP10.26□□□□□ -0.77
TCF4-248ENST00000616053 TCF15Q12870 199 aa10.26□□□□□ -0.77
TCF4-248ENST00000616053 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
TCF4-248ENST00000616053 DOCK5Q9H7D0 1870 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms