RNA–Protein interactions for RNA: ENST00000616000.4

STRA6-222, Transcript of stimulated by retinoic acid 6, human

APPRIS P1 TSL 2 BASIC

Gene STRA6, Length 2,843 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRA6-222	ENST00000616000	SUB1	P53999	127 aa	Known RBP eCLIP	10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	RPL24	P83731	157 aa	Known RBP	10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	TMEM167A	Q8TBQ9	72 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	ASCL2	Q99929	193 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	VGLL1	Q99990	258 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	PCNX1	Q96RV3	2341 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	SNAI2	O43623	268 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	TCRA	P04437	139 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	SCGB2A2	Q13296	93 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	OR4C13	Q8NGP0	309 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	SSUH2	Q9Y2M2	353 aa		10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.54	□□□□□ -0.72
STRA6-222	ENST00000616000	TRAV8-1	A0A0A6YYK1	113 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	SPAAR	A0A1B0GVQ0	90 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	ENSA	O43768	121 aa	Known RBP	10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	NCR2	O95944	276 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	COL8A1	P27658	744 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	LYPD2	Q6UXB3	125 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	DEFB123	Q8N688	67 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	THYN1	Q9P016	225 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	TACC2	O95359	2948 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	CD40	P25942	277 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	TEX36	Q5VZQ5	186 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	HILPDA	Q9Y5L2	63 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	ZZEF1	O43149	2961 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	CACNA1H	O95180	2353 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	ZNF493	Q6ZR52	646 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	INSIG2	Q9Y5U4	225 aa		10.53	□□□□□ -0.72
STRA6-222	ENST00000616000	OVOL3	O00110	214 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	GTSF1L	Q9H1H1	148 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000		U3KQK5	164 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	CSN3	P07498	182 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	CNTFR	P26992	372 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	MRGPRG-AS1	Q2M3A8	158 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000		Q5PR19	223 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000		Q86TA4	180 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	PIP4P2	Q8N4L2	257 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	CCL17	Q92583	94 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	RAB37	Q96AX2	223 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	CSMD1	Q96PZ7	3565 aa		10.52	□□□□□ -0.73
STRA6-222	ENST00000616000	MEF2C	Q06413	473 aa	Predicted RBP	10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	SRSF1	Q07955	248 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	SMAGP	Q0VAQ4	97 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	LINC01559	Q495D7	138 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	CIART	Q8N365	385 aa	Predicted RBP	10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	DEFB124	Q8NES8	71 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000		A0A096LNJ9	63 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	HLA-DRB4	P13762	266 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	HOXB4	P17483	251 aa	Predicted RBP	10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	OTOR	Q9NRC9	128 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	HLA-DRB4	X5D2U9	266 aa		10.51	□□□□□ -0.73
STRA6-222	ENST00000616000	ZNF414	Q96IQ9	312 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000		Q9H3A6	140 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	SPANXB1	Q9NS25	103 aa	Predicted RBP	10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	ATM	Q13315	3056 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	TPR	P12270	2363 aa	Known RBP	10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	HBD	P02042	147 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	THBD	P07204	575 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	OR8A1	Q8NGG7	326 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	TRGV9	Q99603	122 aa		10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	TSSC4	Q9Y5U2	329 aa	Predicted RBP	10.5	□□□□□ -0.73
STRA6-222	ENST00000616000	EXOC3-AS1	Q8N2X6	119 aa		10.49	□□□□□ -0.73
STRA6-222	ENST00000616000	GVINP1	Q7Z2Y8	2422 aa		10.49	□□□□□ -0.73
STRA6-222	ENST00000616000		K7EM74	188 aa		10.49	□□□□□ -0.73
STRA6-222	ENST00000616000	GP9	P14770	177 aa		10.49	□□□□□ -0.73
STRA6-222	ENST00000616000	MRAP2	Q96G30	205 aa		10.49	□□□□□ -0.73
STRA6-222	ENST00000616000	NAA38	Q9BRA0	125 aa	Known RBP	10.49	□□□□□ -0.73
STRA6-222	ENST00000616000	CKS1B	P61024	79 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	CACNG7	P62955	275 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	PRNT	Q86SH4	94 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	IFI27L1	Q96BM0	104 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	TM2D2	Q9BX73	214 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	CTSZ	Q9UBR2	303 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	POLE	Q07864	2286 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	C17orf100	A8MU93	164 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000		E9PLD3	99 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	ADIPOQ	Q15848	244 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	VMA21	Q3ZAQ7	101 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	ZNF502	Q8TBZ5	544 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	TMEM14C	Q9P0S9	112 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	TNFRSF1A	P19438	455 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	RAB9A	P51151	201 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	LYZ	P61626	148 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	TAL2	Q16559	108 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	TMEM108	Q6UXF1	575 aa		10.48	□□□□□ -0.73
STRA6-222	ENST00000616000	FBLL1	A6NHQ2	334 aa	Known RBP	10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	CRYGC	P07315	174 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	ARMS2	P0C7Q2	107 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	FCGR2B	P31994	310 aa	Predicted RBP	10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	IFI27	P40305	119 aa	Predicted RBP	10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	PAX8	Q06710	450 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	PVRIG	Q6DKI7	326 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000		A0A1W2PRD5	423 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000		A0A1W2PRF3	423 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000		A0A1W2PRM7	423 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	NDUFB3	O43676	98 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	CCDC144NL	Q6NUI1	221 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	GOLT1A	Q6ZVE7	132 aa		10.47	□□□□□ -0.73
STRA6-222	ENST00000616000	BCL6B	Q8N143	479 aa	Predicted RBP	10.47	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms