RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 PPT1P50897 306 aa16.18■□□□□ 0.18
CBWD1-223ENST00000613988 CCL20P78556 96 aa16.18■□□□□ 0.18
CBWD1-223ENST00000613988 S100A7AQ86SG5 101 aa16.18■□□□□ 0.18
CBWD1-223ENST00000613988 SPAG8Q99932 426 aaPredicted RBP16.18■□□□□ 0.18
CBWD1-223ENST00000613988 SMDT1Q9H4I9 107 aa16.18■□□□□ 0.18
CBWD1-223ENST00000613988 HYDINQ4G0P3 5121 aa16.18■□□□□ 0.18
CBWD1-223ENST00000613988 A0A1B0GV50 99 aa16.17■□□□□ 0.18
CBWD1-223ENST00000613988 TSPAN4O14817 238 aa16.17■□□□□ 0.18
CBWD1-223ENST00000613988 IFNA1P01562 189 aa16.17■□□□□ 0.18
CBWD1-223ENST00000613988 TAGLN2P37802 199 aaKnown RBP16.17■□□□□ 0.18
CBWD1-223ENST00000613988 PSMB3P49720 205 aa16.17■□□□□ 0.18
CBWD1-223ENST00000613988 OVOL2Q9BRP0 275 aa16.17■□□□□ 0.18
CBWD1-223ENST00000613988 IGHV3OR16-8A0A075B7F1 116 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 ORM2P19652 201 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 ADMP35318 185 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 FGF8P55075 233 aaPredicted RBP16.16■□□□□ 0.18
CBWD1-223ENST00000613988 PEA15Q15121 130 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 GUK1Q16774 197 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 KHDC3LQ587J8 217 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 PATE2Q6UY27 113 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 ZNF600Q6ZNG1 722 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 OR1B1Q8NGR6 318 aa16.16■□□□□ 0.18
CBWD1-223ENST00000613988 EPPK1P58107 5090 aaKnown RBP16.16■□□□□ 0.18
CBWD1-223ENST00000613988 RBFOX3A6NFN3 312 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 K7EMT4 169 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 ZNF207O43670 478 aaKnown RBP16.15■□□□□ 0.18
CBWD1-223ENST00000613988 CD5P06127 495 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 PQLC2Q6ZP29 291 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 MIR17HGQ75NE6 70 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 RNF125Q96EQ8 232 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 DOK5Q9P104 306 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 HIGD1AQ9Y241 93 aa16.15■□□□□ 0.18
CBWD1-223ENST00000613988 PLECQ15149 4684 aaKnown RBP16.15■□□□□ 0.18
CBWD1-223ENST00000613988 HMGB3O15347 200 aaKnown RBP16.14■□□□□ 0.17
CBWD1-223ENST00000613988 S100A7P31151 101 aa16.14■□□□□ 0.17
CBWD1-223ENST00000613988 LYZP61626 148 aa16.14■□□□□ 0.17
CBWD1-223ENST00000613988 RELQ04864 619 aaPredicted RBP16.14■□□□□ 0.17
CBWD1-223ENST00000613988 SPATA31B1PQ5VZV4 182 aa16.14■□□□□ 0.17
CBWD1-223ENST00000613988 SCRT1Q9BWW7 348 aa16.14■□□□□ 0.17
CBWD1-223ENST00000613988 MANBALQ9NQG1 85 aa16.14■□□□□ 0.17
CBWD1-223ENST00000613988 ARL14EPLP0DKL9 152 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 APOC4P55056 127 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 ZNF506Q5JVG8 444 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 LINC00305Q7Z4B0 112 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 STXBP6Q8NFX7 210 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 EIF5A2Q9GZV4 153 aaKnown RBP16.13■□□□□ 0.17
CBWD1-223ENST00000613988 GNG13Q9P2W3 67 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 RNF24Q9Y225 148 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 IL4P05112 153 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 TOR2AQ5JU69 321 aa16.13■□□□□ 0.17
CBWD1-223ENST00000613988 LOC102723971A0A1B0GUV8 181 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 OR4C46A6NHA9 309 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 KRBOX1C9JBD0 128 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 NDUFS6O75380 124 aaKnown RBP16.12■□□□□ 0.17
CBWD1-223ENST00000613988 BCL2P10415 239 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 GCHFRP30047 84 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 TREM1Q9NP99 234 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 TMEM167BQ9NRX6 74 aa16.12■□□□□ 0.17
CBWD1-223ENST00000613988 EIF3GO75821 320 aaKnown RBP eCLIP16.11■□□□□ 0.17
CBWD1-223ENST00000613988 IQCF2Q8IXL9 164 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 FAM167A-AS1Q96KT0 104 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 SLC25A2Q9BXI2 301 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 SMPXQ9UHP9 88 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 VAX2Q9UIW0 290 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 PUS1Q9Y606 427 aaKnown RBP eCLIP16.11■□□□□ 0.17
CBWD1-223ENST00000613988 ARL2-SNX15V9GYD0 113 aa16.11■□□□□ 0.17
CBWD1-223ENST00000613988 SRSF3P84103 164 aaKnown RBP16.1■□□□□ 0.17
CBWD1-223ENST00000613988 ODF3L2Q3SX64 289 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 Q6ZWC4 215 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 SUN5Q8TC36 379 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 UHRF2Q96PU4 802 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 TXNDC17Q9BRA2 123 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 SHANK2-AS3Q9BTD1 123 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 SLC25A39Q9BZJ4 359 aaPredicted RBP16.1■□□□□ 0.17
CBWD1-223ENST00000613988 TMPRSS5Q9H3S3 457 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 TP53TG1Q9Y2A0 90 aa16.1■□□□□ 0.17
CBWD1-223ENST00000613988 IGHV7-4-1A0A0J9YVY3 117 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 UBE2CO00762 179 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 SPRY2O43597 315 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 OR7C2O60412 319 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 ICAM4Q14773 271 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 WFDC3Q8IUB2 231 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 RHPN1-AS1Q9BWJ2 59 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 ALMS1Q8TCU4 4167 aa16.09■□□□□ 0.17
CBWD1-223ENST00000613988 TMEM218A2RU14 115 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 H3BRN7 92 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 CHEK1O14757 476 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 BMI1P35226 326 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 USF2Q15853 346 aaPredicted RBP16.08■□□□□ 0.16
CBWD1-223ENST00000613988 DEFB135Q30KP9 77 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 MORN5Q5VZ52 161 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 TOMM20LQ6UXN7 152 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 NARS2Q96I59 477 aaKnown RBP16.08■□□□□ 0.16
CBWD1-223ENST00000613988 ZNF414Q96IQ9 312 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 RARRES2Q99969 163 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 TMEM231Q9H6L2 316 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 ZFAND3Q9H8U3 227 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 RABAC1Q9UI14 185 aa16.08■□□□□ 0.16
CBWD1-223ENST00000613988 IGHV3-49A0A0A0MS15 119 aa16.07■□□□□ 0.16
CBWD1-223ENST00000613988 TRAV5A0A0B4J249 113 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms