RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 SRSF9Q13242 221 aaKnown RBP eCLIP5.81□□□□□ -1.48
CSDE1-218ENST00000610726 Q6AWC8 147 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 LCN12Q6JVE5 192 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 FAM110DQ8TAY7 271 aaPredicted RBP5.81□□□□□ -1.48
CSDE1-218ENST00000610726 TSKUQ8WUA8 353 aa5.81□□□□□ -1.48
CSDE1-218ENST00000610726 TRBV24-1A0A075B6N3 115 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 FBXL19-AS1Q494R0 122 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 Q6ZPA2 131 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 LINC00518Q8N0U6 118 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 ORMDL3Q8N138 153 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 RITA1Q96K30 269 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 SHANK2-AS3Q9BTD1 123 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 PEF1Q9UBV8 284 aaKnown RBP5.8□□□□□ -1.48
CSDE1-218ENST00000610726 TRAV21A0A0B4J279 112 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 FAM181BA6NEQ2 426 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 FBLL1A6NHQ2 334 aaKnown RBP5.8□□□□□ -1.48
CSDE1-218ENST00000610726 SPATA45Q537H7 98 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 AMMECR1LQ6DCA0 310 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 STHQ8IWL8 128 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 H3BVH4 76 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 SCGB1C2P0DMR2 95 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 HOXA5P20719 270 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM170AQ8WVE7 144 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 C5orf30Q96GV9 206 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM242Q9NWH2 141 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 TRAV9-1A0A075B6T8 112 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 SAP30O75446 220 aa5.8□□□□□ -1.48
CSDE1-218ENST00000610726 SOX21Q9Y651 276 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-218ENST00000610726 NACAE9PAV3 2078 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 PKD1L2Q7Z442 2459 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 C7orf71A4D174 169 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 FAM223BA6NKX1 122 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 HOXB4P17483 251 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-218ENST00000610726 SSBP2P81877 361 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-218ENST00000610726 UTF1Q5T230 341 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 GFI1BQ5VTD9 330 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 FAM223AQ8IWN6 122 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF256Q9Y2P7 627 aaPredicted RBP5.79□□□□□ -1.48
CSDE1-218ENST00000610726 IGLC1P0CG04 106 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 ZFP36P26651 326 aaKnown RBP5.79□□□□□ -1.48
CSDE1-218ENST00000610726 PMCHL1Q16048 86 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 FAM209BQ5JX69 171 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 SAMD13Q5VXD3 122 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 C1orf122Q6ZSJ8 110 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 RNF182Q8N6D2 247 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 DAZ1Q9NQZ3 744 aaKnown RBP5.79□□□□□ -1.48
CSDE1-218ENST00000610726 NCKAP5O14513 1909 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 NUP210LQ5VU65 1888 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 C19orf84I3L1E1 186 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 OVOL1O14753 267 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 IGLV2-14P01704 120 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV4-59P01825 116 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 IGHV4-38-2P0DP08 117 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 PAX1P15863 534 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 C9orf139Q6ZV77 190 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 OR11H6Q8NGC7 330 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 OR1N2Q8NGR9 330 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 PMCHL2Q9BQD1 86 aa5.79□□□□□ -1.48
CSDE1-218ENST00000610726 GGTLC3B5MD39 225 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 DUSP14O95147 198 aaKnown RBP5.78□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF138P52744 262 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 FXYD7P58549 80 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 YPEL3P61236 119 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-218ENST00000610726 FOXL1Q12952 345 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 ERCC8Q13216 396 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM70Q9BUB7 260 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 PROP1O75360 226 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 PSG3Q16557 428 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 DEFB112Q30KQ8 113 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 PRORYQ9H606 182 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 TRGV2A0A075B6R0 118 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF324O75467 553 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-218ENST00000610726 EVI2AP22794 236 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 ACTL10Q5JWF8 245 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 LYZL1Q6UWQ5 148 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 C8orf31Q8N9H6 132 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 DEFB104AQ8WTQ1 72 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 TNFRSF18Q9Y5U5 241 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 TRAV12-3A0A0B4J271 114 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 CENPVL3A0A0U1RRI6 287 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 LOC105371267A0A1B0GV96 52 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 ZNF25P17030 456 aaPredicted RBP5.78□□□□□ -1.48
CSDE1-218ENST00000610726 DTX2Q86UW9 622 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 NUP35Q8NFH5 326 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 NRN1Q9NPD7 142 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 TMEM160Q9NX00 188 aa5.78□□□□□ -1.48
CSDE1-218ENST00000610726 KIAA1549Q9HCM3 1950 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 A0A1B0GW15 77 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 UBE2L6O14933 153 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 NCR2O95944 276 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 IGLV1-47P01700 117 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 HTN3P15516 51 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 HINT1P49773 126 aaPredicted RBP5.77□□□□□ -1.49
CSDE1-218ENST00000610726 PRR20EP86478 221 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 PRR20CP86479 221 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 PRR20DP86480 221 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 PRR20BP86481 221 aa5.77□□□□□ -1.49
CSDE1-218ENST00000610726 PRR20AP86496 221 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms