RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 SNRPD3P62318 126 aaKnown RBP7.47□□□□□ -1.21
COL25A1-208ENST00000610288 S100A7L2Q5SY68 101 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 ETV2O00321 342 aaPredicted RBP7.47□□□□□ -1.21
COL25A1-208ENST00000610288 PLNP26678 52 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 SPRR3Q9UBC9 169 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 RPUSD1Q9UJJ7 312 aaKnown RBP7.47□□□□□ -1.21
COL25A1-208ENST00000610288 CT83Q5H943 113 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 C20orf204Q6ZNR8 217 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 C11orf52Q96A22 123 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 DUX5Q96PT3 197 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 SLC50A1Q9BRV3 221 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 V9GYV3 84 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 SCN5AQ14524 2016 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 H3BMM0 161 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 TAX1BP3O14907 124 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 UBE2L6O14933 153 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 RPL15P61313 204 aaKnown RBP7.47□□□□□ -1.21
COL25A1-208ENST00000610288 KLRD1Q13241 179 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 UBE2WQ96B02 151 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 TRGV9Q99603 122 aa7.47□□□□□ -1.21
COL25A1-208ENST00000610288 NCOR2Q9Y618 2525 aa7.46□□□□□ -1.21
COL25A1-208ENST00000610288 TRAV3A0A0B4J244 114 aa7.46□□□□□ -1.21
COL25A1-208ENST00000610288 FAM231DQ6ZW35 169 aa7.46□□□□□ -1.21
COL25A1-208ENST00000610288 TRBV7-9A0A0J9YWB2 115 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 CD59P13987 128 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 PRB3Q04118 309 aaPredicted RBP7.46□□□□□ -1.22
COL25A1-208ENST00000610288 CLUHP3Q96NS8 147 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 IGHV1-18A0A0C4DH31 117 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 H3BMG7 143 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 H7C1H1 209 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 CSPG4Q6UVK1 2322 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.46□□□□□ -1.22
COL25A1-208ENST00000610288 SRSF8Q9BRL6 282 aaKnown RBP7.46□□□□□ -1.22
COL25A1-208ENST00000610288 SLC25A39Q9BZJ4 359 aaPredicted RBP7.46□□□□□ -1.22
COL25A1-208ENST00000610288 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
COL25A1-208ENST00000610288 DOCK10Q96BY6 2186 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 ZNF138P52744 262 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 ZC2HC1BQ5TFG8 222 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 C1orf122Q6ZSJ8 110 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 ZNF114Q8NC26 417 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 SIGLEC8Q9NYZ4 499 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 PLXNA4Q9HCM2 1894 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 SHANK1Q9Y566 2161 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 IGKV1-39P01597 117 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 IGKV1D-39P04432 117 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 HAPLN4Q86UW8 402 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 TMEM167AQ8TBQ9 72 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 RNF166Q96A37 237 aaPredicted RBP7.45□□□□□ -1.22
COL25A1-208ENST00000610288 CYYR1Q96J86 154 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 PLA2G2EQ9NZK7 142 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.45□□□□□ -1.22
COL25A1-208ENST00000610288 LAGE3Q14657 143 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 COLCA1Q6ZS62 124 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 ZNF329Q86UD4 541 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 RNASE6Q93091 150 aaKnown RBP7.45□□□□□ -1.22
COL25A1-208ENST00000610288 TMEM133Q9H2Q1 129 aa7.45□□□□□ -1.22
COL25A1-208ENST00000610288 TCF20Q9UGU0 1960 aaKnown RBP7.44□□□□□ -1.22
COL25A1-208ENST00000610288 PCNX2A6NKB5 2137 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 NBR2O15453 112 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 CEACAM4O75871 244 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LGALS1P09382 135 aaKnown RBP7.44□□□□□ -1.22
COL25A1-208ENST00000610288 CLEC19AQ6UXS0 136 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LYNX1G3V0Z9 82 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LYNX1P0DP58 116 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LGALS9BQ3B8N2 356 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LGALS9CQ6DKI2 356 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LYPD1Q8N2G4 141 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 FAM168AQ92567 244 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 NLRC5Q86WI3 1866 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 CHD8Q9HCK8 2581 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 SMIM27A0A1W2PRY6 76 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 VDAC2P45880 294 aaPredicted RBP7.44□□□□□ -1.22
COL25A1-208ENST00000610288 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
COL25A1-208ENST00000610288 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 NDUFC2O95298 119 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 RNASE2P10153 161 aaKnown RBP7.44□□□□□ -1.22
COL25A1-208ENST00000610288 LINC00479Q96M42 142 aa7.44□□□□□ -1.22
COL25A1-208ENST00000610288 FER1L5A0AVI2 2057 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 PMS2P5A8MQ11 134 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 M0R2P5 195 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 NCR2O95944 276 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 IGLV3-1P01715 115 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 CD24P25063 80 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 EXOC3-AS1Q8N2X6 119 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 C15orf53Q8NAA6 179 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 JMJD8Q96S16 334 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 PAX1P15863 534 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 C10orf55Q5SWW7 151 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 IGHV1-46P01743 117 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 IGHV3-11P01762 117 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 HS3ST6Q96QI5 342 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 NPIPB5A8MRT5 1133 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 Q86TA4 180 aa7.43□□□□□ -1.22
COL25A1-208ENST00000610288 PLXND1Q9Y4D7 1925 aa7.42□□□□□ -1.22
COL25A1-208ENST00000610288 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
COL25A1-208ENST00000610288 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
COL25A1-208ENST00000610288 LYPD6Q86Y78 171 aa7.42□□□□□ -1.22
COL25A1-208ENST00000610288 HEATR1Q9H583 2144 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms