RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 TEX36Q5VZQ5 186 aa11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 PIP4P1Q86T03 277 aa11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 MRPS16Q9Y3D3 137 aaKnown RBP11.49□□□□□ -0.57
PCDHB16-201ENST00000609684 TYMSP04818 313 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 C3orf79P0CE67 100 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 C5orf30Q96GV9 206 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 USMG5Q96IX5 58 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 HAPLN4Q86UW8 402 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 LAGE3Q14657 143 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 RUSC1-AS1Q66K80 236 aa11.48□□□□□ -0.57
PCDHB16-201ENST00000609684 IL15RAQ13261 267 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 C1orf194Q5T5A4 169 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 SFTA2Q6UW10 78 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 PFN1P07737 140 aaKnown RBP11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 RHPN1-AS1Q9BWJ2 59 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 TRAV12-3A0A0B4J271 114 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 FAM223BA6NKX1 122 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 ATP6V0E1O15342 81 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 CD28P10747 220 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 WT1P19544 449 aaPredicted RBP11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 UBE2E1P51965 193 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 FAM223AQ8IWN6 122 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 LINC00477Q96M19 166 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 WT1-ASQ06250 92 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 Q8NFD4 153 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 DEFB104AQ8WTQ1 72 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 TPSG1Q9NRR2 321 aa11.47□□□□□ -0.57
PCDHB16-201ENST00000609684 NDUFB8O95169 186 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 PDE6HQ13956 83 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 PIP4P2Q8N4L2 257 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 OVOL3O00110 214 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 NSUN5P1Q3KNT7 163 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 CD300EQ496F6 205 aaPredicted RBP11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 AMN1Q8IY45 258 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 MRPL27Q9P0M9 148 aaKnown RBP11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 MUC6Q6W4X9 2439 aa11.46□□□□□ -0.57
PCDHB16-201ENST00000609684 ZNF815PA8K554 130 aa11.46□□□□□ -0.58
PCDHB16-201ENST00000609684 ERCC8Q13216 396 aa11.46□□□□□ -0.58
PCDHB16-201ENST00000609684 DIAPH2-AS1Q14236 149 aa11.46□□□□□ -0.58
PCDHB16-201ENST00000609684 TMEM249Q2WGJ8 235 aa11.46□□□□□ -0.58
PCDHB16-201ENST00000609684 LINC00311Q8N616 119 aa11.46□□□□□ -0.58
PCDHB16-201ENST00000609684 TMEM8BA6NDV4 472 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 MS4A6AQ9H2W1 248 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 TRGV4A0A0C4DH28 118 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 FGF23Q9GZV9 251 aaPredicted RBP11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 FNDC4Q9H6D8 234 aaPredicted RBP11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 hDV102S1A0JD36 115 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 SMKR1H3BMG3 65 aa11.45□□□□□ -0.58
PCDHB16-201ENST00000609684 GGTLC3B5MD39 225 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SLC25A16P16260 332 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 GTSCR1Q86UQ5 136 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 C14orf178Q8N769 122 aaPredicted RBP11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 FAM110DQ8TAY7 271 aaPredicted RBP11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SLC25A2Q9BXI2 301 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 ARFGEF3Q5TH69 2177 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 FAM208BQ5VWN6 2430 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 ARMS2P0C7Q2 107 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 DPH3P1Q9H4G8 78 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SMPXQ9UHP9 88 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 KIF26AQ9ULI4 1882 aaPredicted RBP11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 G3V318 75 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 TDGF1P13385 188 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 YPEL3P61236 119 aaPredicted RBP11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 DAZ1Q9NQZ3 744 aaKnown RBP11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 A0A1B0GUS0 222 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SAP30O75446 220 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SCGB1A1P11684 91 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 C11orf53Q8IXP5 236 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 RCHY1Q96PM5 261 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 SRCAPQ6ZRS2 3230 aa11.44□□□□□ -0.58
PCDHB16-201ENST00000609684 MSMBP08118 114 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 LINC01356Q8N9X3 169 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 A6NNC1 897 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 MED13Q9UHV7 2174 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 SYS1-DBNDD2H3BUS1 97 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 SSC4DQ8WTU2 575 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 NDUFS8O00217 210 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 PCP4P48539 62 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 HSD52Q0P140 79 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 RNF182Q8N6D2 247 aa11.43□□□□□ -0.58
PCDHB16-201ENST00000609684 LINC01559Q495D7 138 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 GFRA4Q9GZZ7 299 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 TRAV2A0A0B4J234 112 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 C10orf91Q5T1B1 145 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 TRBV19A0A075B6N1 114 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 K7EM74 188 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 MCRIP2Q9BUT9 160 aaKnown RBP11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 IGHV2-70DA0A0C4DH43 119 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 GUSBP1Q15486 140 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 ZNF664Q8N3J9 261 aa11.42□□□□□ -0.58
PCDHB16-201ENST00000609684 LINC01549A6NIU2 74 aa11.41□□□□□ -0.58
PCDHB16-201ENST00000609684 SYNJ2BPP57105 145 aa11.41□□□□□ -0.58
PCDHB16-201ENST00000609684 LINC00469Q8N7U9 141 aa11.41□□□□□ -0.58
PCDHB16-201ENST00000609684 ZNF492Q9P255 531 aa11.41□□□□□ -0.58
PCDHB16-201ENST00000609684 LCNL1Q6ZST4 164 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms